Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.34□□□□□ -0.43
Clk1P22518 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.34□□□□□ -0.43
Clk1P22518 Gm38144-201ENSMUST00000192790 465 ntBASIC12.34□□□□□ -0.43
Clk1P22518 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.34□□□□□ -0.43
Clk1P22518 Gm19078-201ENSMUST00000206311 727 ntBASIC12.34□□□□□ -0.43
Clk1P22518 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clk1P22518 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Clk1P22518 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.34□□□□□ -0.43
Clk1P22518 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Clk1P22518 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clk1P22518 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clk1P22518 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clk1P22518 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Clk1P22518 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.34□□□□□ -0.43
Clk1P22518 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Clk1P22518 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clk1P22518 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clk1P22518 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clk1P22518 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.34□□□□□ -0.43
Clk1P22518 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clk1P22518 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Clk1P22518 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clk1P22518 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Clk1P22518 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Clk1P22518 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Clk1P22518 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.43
Clk1P22518 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clk1P22518 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clk1P22518 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Clk1P22518 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clk1P22518 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.33□□□□□ -0.44
Clk1P22518 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clk1P22518 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clk1P22518 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clk1P22518 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clk1P22518 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.33□□□□□ -0.44
Clk1P22518 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.33□□□□□ -0.44
Clk1P22518 Gm7488-201ENSMUST00000117148 684 ntBASIC12.33□□□□□ -0.44
Clk1P22518 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.33□□□□□ -0.44
Clk1P22518 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clk1P22518 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Clk1P22518 Gm28631-201ENSMUST00000190740 334 ntBASIC12.33□□□□□ -0.44
Clk1P22518 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.33□□□□□ -0.44
Clk1P22518 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clk1P22518 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Clk1P22518 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clk1P22518 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Clk1P22518 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clk1P22518 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clk1P22518 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Clk1P22518 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clk1P22518 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clk1P22518 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Clk1P22518 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clk1P22518 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.33□□□□□ -0.44
Clk1P22518 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Clk1P22518 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clk1P22518 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.33□□□□□ -0.44
Clk1P22518 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Clk1P22518 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Clk1P22518 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Clk1P22518 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clk1P22518 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clk1P22518 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clk1P22518 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clk1P22518 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clk1P22518 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clk1P22518 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clk1P22518 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Clk1P22518 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clk1P22518 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clk1P22518 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Clk1P22518 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clk1P22518 AC153506.1-201ENSMUST00000218768 2915 ntBASIC12.32□□□□□ -0.44
Clk1P22518 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clk1P22518 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Clk1P22518 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.32□□□□□ -0.44
Clk1P22518 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clk1P22518 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Clk1P22518 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.32□□□□□ -0.44
Clk1P22518 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.32□□□□□ -0.44
Clk1P22518 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Clk1P22518 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.32□□□□□ -0.44
Clk1P22518 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.32□□□□□ -0.44
Clk1P22518 Gm43094-201ENSMUST00000196549 921 ntBASIC12.32□□□□□ -0.44
Clk1P22518 Gm42612-201ENSMUST00000197986 623 ntBASIC12.32□□□□□ -0.44
Clk1P22518 Gm43170-201ENSMUST00000199827 612 ntBASIC12.32□□□□□ -0.44
Clk1P22518 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.32□□□□□ -0.44
Clk1P22518 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.32□□□□□ -0.44
Clk1P22518 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.32□□□□□ -0.44
Clk1P22518 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clk1P22518 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clk1P22518 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clk1P22518 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.32□□□□□ -0.44
Clk1P22518 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Clk1P22518 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.32□□□□□ -0.44
Clk1P22518 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clk1P22518 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clk1P22518 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Clk1P22518 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms