Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx47Q9CWX9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx47Q9CWX9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Ddx47Q9CWX9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ddx47Q9CWX9 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx47Q9CWX9 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx47Q9CWX9 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx47Q9CWX9 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx47Q9CWX9 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx47Q9CWX9 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Ddx47Q9CWX9 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx47Q9CWX9 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx47Q9CWX9 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx47Q9CWX9 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ddx47Q9CWX9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Gm14494-201ENSMUST00000118786 435 ntBASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ddx47Q9CWX9 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx47Q9CWX9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx47Q9CWX9 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx47Q9CWX9 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx47Q9CWX9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Ddx47Q9CWX9 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Ddx47Q9CWX9 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx47Q9CWX9 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ddx47Q9CWX9 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Gm25948-201ENSMUST00000175334 112 ntBASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx47Q9CWX9 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx47Q9CWX9 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx47Q9CWX9 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx47Q9CWX9 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Ddx47Q9CWX9 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Ddx47Q9CWX9 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx47Q9CWX9 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx47Q9CWX9 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx47Q9CWX9 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx47Q9CWX9 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx47Q9CWX9 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx47Q9CWX9 Daam2-202ENSMUST00000224595 1926 ntBASIC13.51□□□□□ -0.25
Ddx47Q9CWX9 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx47Q9CWX9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms