Protein–RNA interactions for Protein: Q8CFI7

Polr2b, DNA-directed RNA polymerase II subunit RPB2, mousemouse

Known RBP Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2bQ8CFI7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 Gm16202-201ENSMUST00000117532 544 ntBASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 Gm44069-201ENSMUST00000204898 506 ntBASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Polr2bQ8CFI7 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Polr2bQ8CFI7 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Polr2bQ8CFI7 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Polr2bQ8CFI7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Gm11618-201ENSMUST00000117946 267 ntBASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Gm27331-201ENSMUST00000183705 60 ntBASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Gm29127-201ENSMUST00000188304 517 ntBASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Polr2bQ8CFI7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.13□□□□□ -0.15
Polr2bQ8CFI7 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Polr2bQ8CFI7 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Polr2bQ8CFI7 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Polr2bQ8CFI7 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Polr2bQ8CFI7 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Polr2bQ8CFI7 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Polr2bQ8CFI7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Polr2bQ8CFI7 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Polr2bQ8CFI7 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.13□□□□□ -0.15
Polr2bQ8CFI7 Gm13369-201ENSMUST00000119442 987 ntBASIC14.13□□□□□ -0.15
Polr2bQ8CFI7 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.13□□□□□ -0.15
Polr2bQ8CFI7 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Polr2bQ8CFI7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Polr2bQ8CFI7 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.13□□□□□ -0.15
Polr2bQ8CFI7 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.13□□□□□ -0.15
Polr2bQ8CFI7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Polr2bQ8CFI7 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Polr2bQ8CFI7 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.13□□□□□ -0.15
Polr2bQ8CFI7 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.13□□□□□ -0.15
Polr2bQ8CFI7 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.13□□□□□ -0.15
Polr2bQ8CFI7 Gm45841-201ENSMUST00000207700 164 ntBASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms