Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Depdc1bQ8BH88 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Depdc1bQ8BH88 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Depdc1bQ8BH88 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Depdc1bQ8BH88 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Depdc1bQ8BH88 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Mir1894-201ENSMUST00000122802 81 ntBASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 AC125117.1-201ENSMUST00000228121 468 ntBASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
Depdc1bQ8BH88 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Depdc1bQ8BH88 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Depdc1bQ8BH88 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Depdc1bQ8BH88 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC14.33□□□□□ -0.11
Depdc1bQ8BH88 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Depdc1bQ8BH88 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Gm15376-201ENSMUST00000122258 783 ntBASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Mir7085-201ENSMUST00000184353 66 ntBASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Depdc1bQ8BH88 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Gm6244-201ENSMUST00000178732 841 ntBASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Depdc1bQ8BH88 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Depdc1bQ8BH88 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Depdc1bQ8BH88 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Depdc1bQ8BH88 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Depdc1bQ8BH88 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.31□□□□□ -0.12
Depdc1bQ8BH88 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Depdc1bQ8BH88 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Depdc1bQ8BH88 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Depdc1bQ8BH88 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Depdc1bQ8BH88 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Depdc1bQ8BH88 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Depdc1bQ8BH88 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Depdc1bQ8BH88 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Depdc1bQ8BH88 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.31□□□□□ -0.12
Depdc1bQ8BH88 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms