Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Chchd1-203ENSMUST00000224633 557 ntBASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim6Q8BGE7 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim6Q8BGE7 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
Trim6Q8BGE7 Gm13722-201ENSMUST00000117964 3066 ntBASIC14□□□□□ -0.17
Trim6Q8BGE7 Gm15459-201ENSMUST00000117405 1941 ntBASIC14□□□□□ -0.17
Trim6Q8BGE7 Gm8355-201ENSMUST00000177767 1941 ntBASIC14□□□□□ -0.17
Trim6Q8BGE7 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trim6Q8BGE7 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim6Q8BGE7 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Trim6Q8BGE7 Gm3436-201ENSMUST00000179930 840 ntBASIC14□□□□□ -0.17
Trim6Q8BGE7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14□□□□□ -0.17
Trim6Q8BGE7 Gm2213-201ENSMUST00000197485 688 ntBASIC14□□□□□ -0.17
Trim6Q8BGE7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14□□□□□ -0.17
Trim6Q8BGE7 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trim6Q8BGE7 Gm5320-201ENSMUST00000207163 1519 ntBASIC14□□□□□ -0.17
Trim6Q8BGE7 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.99□□□□□ -0.17
Trim6Q8BGE7 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim6Q8BGE7 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms