Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Scaf4Q6PFF0 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Gm5312-201ENSMUST00000203728 547 ntBASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.99□□□□□ -0.33
Scaf4Q6PFF0 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Gm27680-201ENSMUST00000184192 160 ntBASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Gm5161-201ENSMUST00000075243 853 ntBASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.98□□□□□ -0.33
Scaf4Q6PFF0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scaf4Q6PFF0 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms