Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ParpbpQ6IRT3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ParpbpQ6IRT3 Mir7654-201ENSMUST00000185082 70 ntBASIC12.4□□□□□ -0.42
ParpbpQ6IRT3 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.4□□□□□ -0.42
ParpbpQ6IRT3 Gm8515-201ENSMUST00000194852 576 ntBASIC12.4□□□□□ -0.42
ParpbpQ6IRT3 Gm18041-201ENSMUST00000218210 618 ntBASIC12.4□□□□□ -0.42
ParpbpQ6IRT3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ParpbpQ6IRT3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
ParpbpQ6IRT3 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ParpbpQ6IRT3 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ParpbpQ6IRT3 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ParpbpQ6IRT3 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.4□□□□□ -0.42
ParpbpQ6IRT3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ParpbpQ6IRT3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ParpbpQ6IRT3 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ParpbpQ6IRT3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ParpbpQ6IRT3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ParpbpQ6IRT3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
ParpbpQ6IRT3 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ParpbpQ6IRT3 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ParpbpQ6IRT3 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
ParpbpQ6IRT3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.4□□□□□ -0.43
ParpbpQ6IRT3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
ParpbpQ6IRT3 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
ParpbpQ6IRT3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Gm11424-201ENSMUST00000121929 829 ntBASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Gm15429-201ENSMUST00000151268 798 ntBASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Gm5745-201ENSMUST00000183748 313 ntBASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Gm38223-201ENSMUST00000194484 695 ntBASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Gm6180-201ENSMUST00000065243 498 ntBASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ParpbpQ6IRT3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Gm38144-201ENSMUST00000192790 465 ntBASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Gm5186-201ENSMUST00000218781 920 ntBASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ParpbpQ6IRT3 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms