Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Gm15371-201ENSMUST00000117057 784 ntBASIC10.15□□□□□ -0.79
Notch3Q61982 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.15□□□□□ -0.79
Notch3Q61982 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Notch3Q61982 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.15□□□□□ -0.79
Notch3Q61982 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Notch3Q61982 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Notch3Q61982 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Notch3Q61982 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.15□□□□□ -0.79
Notch3Q61982 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Notch3Q61982 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Notch3Q61982 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Notch3Q61982 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Notch3Q61982 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.14□□□□□ -0.79
Notch3Q61982 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC10.14□□□□□ -0.79
Notch3Q61982 Cts7-204ENSMUST00000225321 1257 ntBASIC10.14□□□□□ -0.79
Notch3Q61982 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Notch3Q61982 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Notch3Q61982 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Notch3Q61982 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Notch3Q61982 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Il17rd-203ENSMUST00000225146 3366 ntBASIC10.13□□□□□ -0.79
Notch3Q61982 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.13□□□□□ -0.79
Notch3Q61982 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC10.13□□□□□ -0.79
Notch3Q61982 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.13□□□□□ -0.79
Notch3Q61982 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Notch3Q61982 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC10.13□□□□□ -0.79
Notch3Q61982 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Gm9347-201ENSMUST00000211473 1607 ntBASIC10.13□□□□□ -0.79
Notch3Q61982 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Notch3Q61982 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 AC126549.2-201ENSMUST00000223997 1976 ntBASIC10.13□□□□□ -0.79
Notch3Q61982 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Notch3Q61982 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.13□□□□□ -0.79
Notch3Q61982 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Notch3Q61982 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Notch3Q61982 Gm12241-201ENSMUST00000118330 726 ntBASIC10.13□□□□□ -0.79
Notch3Q61982 Gm17823-201ENSMUST00000217830 1006 ntBASIC10.13□□□□□ -0.79
Notch3Q61982 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Gm43205-201ENSMUST00000198622 1968 ntBASIC10.13□□□□□ -0.79
Notch3Q61982 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Notch3Q61982 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms