Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.1■□□□□ 0.49
ASIC1P78348 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
ASIC1P78348 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
ASIC1P78348 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.1■□□□□ 0.49
ASIC1P78348 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.1■□□□□ 0.49
ASIC1P78348 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
ASIC1P78348 RN7SL589P-201ENST00000481268 310 ntBASIC18.1■□□□□ 0.49
ASIC1P78348 ALG1L5P-201ENST00000482043 771 ntBASIC18.1■□□□□ 0.49
ASIC1P78348 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.1■□□□□ 0.49
ASIC1P78348 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.1■□□□□ 0.49
ASIC1P78348 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.1■□□□□ 0.49
ASIC1P78348 C20orf181-201ENST00000623918 480 ntBASIC18.1■□□□□ 0.49
ASIC1P78348 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.1■□□□□ 0.49
ASIC1P78348 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.1■□□□□ 0.49
ASIC1P78348 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.1■□□□□ 0.49
ASIC1P78348 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.1■□□□□ 0.49
ASIC1P78348 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.09■□□□□ 0.49
ASIC1P78348 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.09■□□□□ 0.49
ASIC1P78348 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ASIC1P78348 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ASIC1P78348 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ASIC1P78348 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ASIC1P78348 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ASIC1P78348 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ASIC1P78348 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ASIC1P78348 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ASIC1P78348 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ASIC1P78348 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ASIC1P78348 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.09■□□□□ 0.49
ASIC1P78348 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ASIC1P78348 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ASIC1P78348 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ASIC1P78348 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ASIC1P78348 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.09■□□□□ 0.49
ASIC1P78348 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ASIC1P78348 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.09■□□□□ 0.49
ASIC1P78348 SPDYE11-202ENST00000450699 704 ntBASIC18.09■□□□□ 0.49
ASIC1P78348 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.09■□□□□ 0.49
ASIC1P78348 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.09■□□□□ 0.49
ASIC1P78348 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.09■□□□□ 0.49
ASIC1P78348 SPDYE9P-201ENST00000570642 692 ntBASIC18.09■□□□□ 0.49
ASIC1P78348 MIR4321-201ENST00000592276 80 ntBASIC18.09■□□□□ 0.49
ASIC1P78348 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.09■□□□□ 0.49
ASIC1P78348 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.09■□□□□ 0.49
ASIC1P78348 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ASIC1P78348 SPDYE10P-202ENST00000612005 668 ntBASIC18.09■□□□□ 0.49
ASIC1P78348 SPDYE8P-202ENST00000612377 668 ntBASIC18.09■□□□□ 0.49
ASIC1P78348 AC008267.7-201ENST00000624570 1194 ntBASIC18.09■□□□□ 0.49
ASIC1P78348 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.09■□□□□ 0.49
ASIC1P78348 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.09■□□□□ 0.49
ASIC1P78348 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.09■□□□□ 0.49
ASIC1P78348 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ASIC1P78348 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.09■□□□□ 0.49
ASIC1P78348 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ASIC1P78348 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.09■□□□□ 0.49
ASIC1P78348 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.09■□□□□ 0.49
ASIC1P78348 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ASIC1P78348 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
ASIC1P78348 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
ASIC1P78348 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ASIC1P78348 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ASIC1P78348 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ASIC1P78348 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ASIC1P78348 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.09■□□□□ 0.49
ASIC1P78348 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.08■□□□□ 0.49
ASIC1P78348 AC008677.1-201ENST00000519230 1561 ntBASIC18.08■□□□□ 0.49
ASIC1P78348 FOXO1B-201ENST00000504678 1527 ntBASIC18.08■□□□□ 0.49
ASIC1P78348 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
ASIC1P78348 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ASIC1P78348 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.08■□□□□ 0.49
ASIC1P78348 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ASIC1P78348 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ASIC1P78348 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.08■□□□□ 0.49
ASIC1P78348 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ASIC1P78348 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ASIC1P78348 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ASIC1P78348 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.48
ASIC1P78348 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.08■□□□□ 0.48
ASIC1P78348 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ASIC1P78348 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ASIC1P78348 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.08■□□□□ 0.48
ASIC1P78348 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.08■□□□□ 0.48
ASIC1P78348 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
ASIC1P78348 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.08■□□□□ 0.48
ASIC1P78348 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.08■□□□□ 0.48
ASIC1P78348 AC245100.5-201ENST00000452108 331 ntBASIC18.08■□□□□ 0.48
ASIC1P78348 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms