Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 AC093022.1-201ENSMUST00000226949 1072 ntBASIC14.03□□□□□ -0.16
NrlP54846 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NrlP54846 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NrlP54846 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.03□□□□□ -0.16
NrlP54846 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
NrlP54846 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
NrlP54846 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.03□□□□□ -0.16
NrlP54846 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NrlP54846 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NrlP54846 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NrlP54846 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NrlP54846 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
NrlP54846 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NrlP54846 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NrlP54846 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NrlP54846 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NrlP54846 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
NrlP54846 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
NrlP54846 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NrlP54846 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NrlP54846 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NrlP54846 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NrlP54846 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.02□□□□□ -0.16
NrlP54846 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NrlP54846 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NrlP54846 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NrlP54846 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NrlP54846 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NrlP54846 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
NrlP54846 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NrlP54846 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NrlP54846 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NrlP54846 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
NrlP54846 Gm6023-201ENSMUST00000118217 606 ntBASIC14.02□□□□□ -0.17
NrlP54846 Gm11591-201ENSMUST00000120063 702 ntBASIC14.02□□□□□ -0.17
NrlP54846 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NrlP54846 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NrlP54846 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NrlP54846 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.02□□□□□ -0.17
NrlP54846 Gm29199-201ENSMUST00000187766 775 ntBASIC14.02□□□□□ -0.17
NrlP54846 Gm37259-201ENSMUST00000193903 849 ntBASIC14.02□□□□□ -0.17
NrlP54846 Gm38158-201ENSMUST00000194617 339 ntBASIC14.02□□□□□ -0.17
NrlP54846 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.02□□□□□ -0.17
NrlP54846 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.02□□□□□ -0.17
NrlP54846 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NrlP54846 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NrlP54846 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
NrlP54846 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NrlP54846 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NrlP54846 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NrlP54846 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NrlP54846 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NrlP54846 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NrlP54846 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NrlP54846 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NrlP54846 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
NrlP54846 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NrlP54846 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.01□□□□□ -0.17
NrlP54846 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NrlP54846 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NrlP54846 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.01□□□□□ -0.17
NrlP54846 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NrlP54846 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.01□□□□□ -0.17
NrlP54846 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NrlP54846 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NrlP54846 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NrlP54846 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NrlP54846 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NrlP54846 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NrlP54846 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NrlP54846 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NrlP54846 Gm22323-201ENSMUST00000103832 109 ntBASIC14.01□□□□□ -0.17
NrlP54846 Gm15370-201ENSMUST00000117158 253 ntBASIC14.01□□□□□ -0.17
NrlP54846 Gm6447-201ENSMUST00000118905 835 ntBASIC14.01□□□□□ -0.17
NrlP54846 Gm13297-201ENSMUST00000120205 934 ntBASIC14.01□□□□□ -0.17
NrlP54846 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.01□□□□□ -0.17
NrlP54846 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NrlP54846 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NrlP54846 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
NrlP54846 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NrlP54846 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NrlP54846 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NrlP54846 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NrlP54846 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
NrlP54846 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NrlP54846 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NrlP54846 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NrlP54846 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NrlP54846 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NrlP54846 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
NrlP54846 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
NrlP54846 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
NrlP54846 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
NrlP54846 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NrlP54846 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
NrlP54846 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14□□□□□ -0.17
NrlP54846 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14□□□□□ -0.17
NrlP54846 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC14□□□□□ -0.17
NrlP54846 Gm11637-201ENSMUST00000120601 592 ntBASIC14□□□□□ -0.17
NrlP54846 Gm11658-201ENSMUST00000120913 1008 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms