Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Slc6a1P31648 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.35□□□□□ -0.59
Slc6a1P31648 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Slc6a1P31648 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a1P31648 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a1P31648 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a1P31648 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Slc6a1P31648 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a1P31648 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a1P31648 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a1P31648 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a1P31648 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a1P31648 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a1P31648 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a1P31648 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a1P31648 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.35□□□□□ -0.59
Slc6a1P31648 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a1P31648 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a1P31648 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a1P31648 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a1P31648 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a1P31648 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a1P31648 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Slc6a1P31648 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Slc6a1P31648 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.34□□□□□ -0.59
Slc6a1P31648 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Slc6a1P31648 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.34□□□□□ -0.59
Slc6a1P31648 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.34□□□□□ -0.59
Slc6a1P31648 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC11.34□□□□□ -0.59
Slc6a1P31648 Gm14057-201ENSMUST00000120631 482 ntBASIC11.34□□□□□ -0.59
Slc6a1P31648 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.34□□□□□ -0.59
Slc6a1P31648 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.34□□□□□ -0.59
Slc6a1P31648 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC11.34□□□□□ -0.59
Slc6a1P31648 Gm25144-201ENSMUST00000179561 110 ntBASIC11.34□□□□□ -0.59
Slc6a1P31648 Gm25352-201ENSMUST00000179815 110 ntBASIC11.34□□□□□ -0.59
Slc6a1P31648 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Slc6a1P31648 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Slc6a1P31648 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Slc6a1P31648 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.34□□□□□ -0.59
Slc6a1P31648 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Slc6a1P31648 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc6a1P31648 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.59
Slc6a1P31648 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Slc6a1P31648 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Slc6a1P31648 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Slc6a1P31648 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.33□□□□□ -0.6
Slc6a1P31648 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
Slc6a1P31648 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Slc6a1P31648 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC11.33□□□□□ -0.6
Slc6a1P31648 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.33□□□□□ -0.6
Slc6a1P31648 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.33□□□□□ -0.6
Slc6a1P31648 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc6a1P31648 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.33□□□□□ -0.6
Slc6a1P31648 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms