Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Gm23984-201ENSMUST00000157139 203 ntBASIC10.68□□□□□ -0.7
P04940 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
P04940 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC10.68□□□□□ -0.7
P04940 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
P04940 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Gm9947-201ENSMUST00000067599 2920 ntBASIC10.68□□□□□ -0.7
P04940 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
P04940 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.68□□□□□ -0.7
P04940 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
P04940 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
P04940 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
P04940 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
P04940 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.67□□□□□ -0.7
P04940 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
P04940 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Mir686-201ENSMUST00000102174 109 ntBASIC10.67□□□□□ -0.7
P04940 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
P04940 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.67□□□□□ -0.7
P04940 Gm8213-201ENSMUST00000118191 441 ntBASIC10.67□□□□□ -0.7
P04940 Gm11918-201ENSMUST00000121660 179 ntBASIC10.67□□□□□ -0.7
P04940 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Gm38671-201ENSMUST00000200573 130 ntBASIC10.67□□□□□ -0.7
P04940 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Gm9908-201ENSMUST00000211534 448 ntBASIC10.67□□□□□ -0.7
P04940 Gm8598-201ENSMUST00000221184 836 ntBASIC10.67□□□□□ -0.7
P04940 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.67□□□□□ -0.7
P04940 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
P04940 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
P04940 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
P04940 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
P04940 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
P04940 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
P04940 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.67□□□□□ -0.7
P04940 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
P04940 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
P04940 AC121805.2-201ENSMUST00000218808 2538 ntBASIC10.66□□□□□ -0.7
P04940 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P04940 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.66□□□□□ -0.7
P04940 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04940 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.66□□□□□ -0.7
P04940 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04940 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04940 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.66□□□□□ -0.7
P04940 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.66□□□□□ -0.7
P04940 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04940 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
P04940 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04940 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P04940 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04940 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
P04940 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P04940 Gm10156-201ENSMUST00000122364 462 ntBASIC10.66□□□□□ -0.7
P04940 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.66□□□□□ -0.7
P04940 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P04940 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
P04940 Gm6745-201ENSMUST00000199216 526 ntBASIC10.66□□□□□ -0.7
P04940 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.66□□□□□ -0.7
P04940 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms