Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC9.61□□□□□ -0.87
TcraP01849 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Mir874-201ENSMUST00000104769 76 ntBASIC9.61□□□□□ -0.87
TcraP01849 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC9.61□□□□□ -0.87
TcraP01849 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC9.61□□□□□ -0.87
TcraP01849 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC9.61□□□□□ -0.87
TcraP01849 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC9.61□□□□□ -0.87
TcraP01849 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Gm44771-201ENSMUST00000206975 626 ntBASIC9.61□□□□□ -0.87
TcraP01849 AC139350.3-201ENSMUST00000226151 420 ntBASIC9.61□□□□□ -0.87
TcraP01849 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Gm44851-201ENSMUST00000205735 2309 ntBASIC9.61□□□□□ -0.87
TcraP01849 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC9.61□□□□□ -0.87
TcraP01849 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC9.61□□□□□ -0.87
TcraP01849 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
TcraP01849 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.6□□□□□ -0.87
TcraP01849 Gm42863-201ENSMUST00000197875 2958 ntBASIC9.6□□□□□ -0.87
TcraP01849 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
TcraP01849 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Gm6973-201ENSMUST00000117080 721 ntBASIC9.6□□□□□ -0.87
TcraP01849 Gm12892-201ENSMUST00000117367 1146 ntBASIC9.6□□□□□ -0.87
TcraP01849 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC9.6□□□□□ -0.87
TcraP01849 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC9.6□□□□□ -0.87
TcraP01849 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC9.6□□□□□ -0.87
TcraP01849 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC9.6□□□□□ -0.87
TcraP01849 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC9.6□□□□□ -0.87
TcraP01849 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC9.6□□□□□ -0.87
TcraP01849 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
TcraP01849 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
TcraP01849 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
TcraP01849 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
TcraP01849 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC9.59□□□□□ -0.87
TcraP01849 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
TcraP01849 Gm15459-201ENSMUST00000117405 1941 ntBASIC9.59□□□□□ -0.87
TcraP01849 Gm8355-201ENSMUST00000177767 1941 ntBASIC9.59□□□□□ -0.87
TcraP01849 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms