Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atg4a-psA0A0G2JFS9 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Gm13369-201ENSMUST00000119442 987 ntBASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Gm27839-201ENSMUST00000184242 106 ntBASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Gm6458-201ENSMUST00000211573 635 ntBASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Gm45643-201ENSMUST00000211364 1484 ntBASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Gm22331-201ENSMUST00000158066 136 ntBASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Gm27331-201ENSMUST00000183705 60 ntBASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Gm6091-201ENSMUST00000098307 165 ntBASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Atg4a-psA0A0G2JFS9 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Atg4a-psA0A0G2JFS9 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Atg4a-psA0A0G2JFS9 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.96■□□□□ 0.14
Atg4a-psA0A0G2JFS9 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Atg4a-psA0A0G2JFS9 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC15.96■□□□□ 0.14
Atg4a-psA0A0G2JFS9 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Atg4a-psA0A0G2JFS9 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Atg4a-psA0A0G2JFS9 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms