Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
H2afb2S4R1M3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
H2afb2S4R1M3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
H2afb2S4R1M3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
H2afb2S4R1M3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.35■■□□□ 1.01
H2afb2S4R1M3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
H2afb2S4R1M3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
H2afb2S4R1M3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
H2afb2S4R1M3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.34■■□□□ 1.01
H2afb2S4R1M3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
H2afb2S4R1M3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
H2afb2S4R1M3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
H2afb2S4R1M3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
H2afb2S4R1M3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
H2afb2S4R1M3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
H2afb2S4R1M3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.33■■□□□ 1.01
H2afb2S4R1M3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
H2afb2S4R1M3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
H2afb2S4R1M3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
H2afb2S4R1M3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
H2afb2S4R1M3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
H2afb2S4R1M3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
H2afb2S4R1M3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
H2afb2S4R1M3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.32■■□□□ 1
H2afb2S4R1M3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.31■■□□□ 1
H2afb2S4R1M3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
H2afb2S4R1M3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.31■■□□□ 1
H2afb2S4R1M3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
H2afb2S4R1M3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.31■■□□□ 1
H2afb2S4R1M3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.31■■□□□ 1
H2afb2S4R1M3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
H2afb2S4R1M3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.31■■□□□ 1
H2afb2S4R1M3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
H2afb2S4R1M3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
H2afb2S4R1M3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
H2afb2S4R1M3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
H2afb2S4R1M3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.3■■□□□ 1
H2afb2S4R1M3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
H2afb2S4R1M3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.3■■□□□ 1
H2afb2S4R1M3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
H2afb2S4R1M3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
H2afb2S4R1M3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
H2afb2S4R1M3 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
H2afb2S4R1M3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
H2afb2S4R1M3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
H2afb2S4R1M3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.29■■□□□ 1
H2afb2S4R1M3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
H2afb2S4R1M3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
H2afb2S4R1M3 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.29■■□□□ 1
H2afb2S4R1M3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.29■■□□□ 1
H2afb2S4R1M3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
H2afb2S4R1M3 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.28■■□□□ 1
H2afb2S4R1M3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
H2afb2S4R1M3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
H2afb2S4R1M3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
H2afb2S4R1M3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
H2afb2S4R1M3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
H2afb2S4R1M3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.28■■□□□ 1
H2afb2S4R1M3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
H2afb2S4R1M3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
H2afb2S4R1M3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
H2afb2S4R1M3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.28■■□□□ 1
H2afb2S4R1M3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
H2afb2S4R1M3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.27■■□□□ 1
H2afb2S4R1M3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
H2afb2S4R1M3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
H2afb2S4R1M3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
H2afb2S4R1M3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
H2afb2S4R1M3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
H2afb2S4R1M3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
H2afb2S4R1M3 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
H2afb2S4R1M3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.26■□□□□ 0.99
H2afb2S4R1M3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
H2afb2S4R1M3 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
H2afb2S4R1M3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
H2afb2S4R1M3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.25■□□□□ 0.99
H2afb2S4R1M3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
H2afb2S4R1M3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
H2afb2S4R1M3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
H2afb2S4R1M3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
H2afb2S4R1M3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
H2afb2S4R1M3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
H2afb2S4R1M3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H2afb2S4R1M3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
H2afb2S4R1M3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
H2afb2S4R1M3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H2afb2S4R1M3 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H2afb2S4R1M3 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.24■□□□□ 0.99
H2afb2S4R1M3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
H2afb2S4R1M3 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.24■□□□□ 0.99
H2afb2S4R1M3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
H2afb2S4R1M3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
H2afb2S4R1M3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.23■□□□□ 0.99
H2afb2S4R1M3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H2afb2S4R1M3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H2afb2S4R1M3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
H2afb2S4R1M3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
H2afb2S4R1M3 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
H2afb2S4R1M3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
H2afb2S4R1M3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms