Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RpgrQ9R0X5 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RpgrQ9R0X5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.42■■□□□ 1.02
RpgrQ9R0X5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RpgrQ9R0X5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RpgrQ9R0X5 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.42■■□□□ 1.02
RpgrQ9R0X5 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.42■■□□□ 1.02
RpgrQ9R0X5 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RpgrQ9R0X5 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.41■■□□□ 1.02
RpgrQ9R0X5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RpgrQ9R0X5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.41■■□□□ 1.02
RpgrQ9R0X5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
RpgrQ9R0X5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RpgrQ9R0X5 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RpgrQ9R0X5 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.41■■□□□ 1.02
RpgrQ9R0X5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.4■■□□□ 1.02
RpgrQ9R0X5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RpgrQ9R0X5 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
RpgrQ9R0X5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RpgrQ9R0X5 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RpgrQ9R0X5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
RpgrQ9R0X5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RpgrQ9R0X5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RpgrQ9R0X5 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RpgrQ9R0X5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RpgrQ9R0X5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RpgrQ9R0X5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RpgrQ9R0X5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.39■■□□□ 1.01
RpgrQ9R0X5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RpgrQ9R0X5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RpgrQ9R0X5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RpgrQ9R0X5 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RpgrQ9R0X5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RpgrQ9R0X5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RpgrQ9R0X5 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RpgrQ9R0X5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.38■■□□□ 1.01
RpgrQ9R0X5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RpgrQ9R0X5 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RpgrQ9R0X5 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RpgrQ9R0X5 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RpgrQ9R0X5 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RpgrQ9R0X5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RpgrQ9R0X5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.37■■□□□ 1.01
RpgrQ9R0X5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
RpgrQ9R0X5 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RpgrQ9R0X5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RpgrQ9R0X5 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RpgrQ9R0X5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RpgrQ9R0X5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
RpgrQ9R0X5 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.36■■□□□ 1.01
RpgrQ9R0X5 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RpgrQ9R0X5 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
RpgrQ9R0X5 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RpgrQ9R0X5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RpgrQ9R0X5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RpgrQ9R0X5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RpgrQ9R0X5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RpgrQ9R0X5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
RpgrQ9R0X5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RpgrQ9R0X5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC21.35■■□□□ 1.01
RpgrQ9R0X5 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RpgrQ9R0X5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RpgrQ9R0X5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RpgrQ9R0X5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RpgrQ9R0X5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RpgrQ9R0X5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RpgrQ9R0X5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RpgrQ9R0X5 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.33■■□□□ 1.01
RpgrQ9R0X5 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RpgrQ9R0X5 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RpgrQ9R0X5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RpgrQ9R0X5 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RpgrQ9R0X5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RpgrQ9R0X5 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.33■■□□□ 1
RpgrQ9R0X5 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
RpgrQ9R0X5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RpgrQ9R0X5 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RpgrQ9R0X5 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RpgrQ9R0X5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.32■■□□□ 1
RpgrQ9R0X5 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.32■■□□□ 1
RpgrQ9R0X5 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RpgrQ9R0X5 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RpgrQ9R0X5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RpgrQ9R0X5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RpgrQ9R0X5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.32■■□□□ 1
RpgrQ9R0X5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.31■■□□□ 1
RpgrQ9R0X5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RpgrQ9R0X5 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RpgrQ9R0X5 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RpgrQ9R0X5 Gm22567-201ENSMUST00000175542 342 ntBASIC21.31■■□□□ 1
RpgrQ9R0X5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RpgrQ9R0X5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RpgrQ9R0X5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.3■■□□□ 1
RpgrQ9R0X5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.3■■□□□ 1
RpgrQ9R0X5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RpgrQ9R0X5 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RpgrQ9R0X5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.3■■□□□ 1
RpgrQ9R0X5 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RpgrQ9R0X5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RpgrQ9R0X5 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms