Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Gm9959-201ENSMUST00000068277 390 ntBASIC21.53■■□□□ 1.04
Shroom3Q9QXN0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Shroom3Q9QXN0 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Shroom3Q9QXN0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.52■■□□□ 1.04
Shroom3Q9QXN0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.52■■□□□ 1.04
Shroom3Q9QXN0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Shroom3Q9QXN0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Shroom3Q9QXN0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Shroom3Q9QXN0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Shroom3Q9QXN0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.51■■□□□ 1.03
Shroom3Q9QXN0 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.51■■□□□ 1.03
Shroom3Q9QXN0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Shroom3Q9QXN0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Shroom3Q9QXN0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Shroom3Q9QXN0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Shroom3Q9QXN0 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Shroom3Q9QXN0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Shroom3Q9QXN0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Shroom3Q9QXN0 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.5■■□□□ 1.03
Shroom3Q9QXN0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Shroom3Q9QXN0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Shroom3Q9QXN0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Shroom3Q9QXN0 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Shroom3Q9QXN0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Shroom3Q9QXN0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Shroom3Q9QXN0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Shroom3Q9QXN0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Shroom3Q9QXN0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Shroom3Q9QXN0 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Shroom3Q9QXN0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Shroom3Q9QXN0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Shroom3Q9QXN0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Shroom3Q9QXN0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Shroom3Q9QXN0 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Shroom3Q9QXN0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Shroom3Q9QXN0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Shroom3Q9QXN0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Shroom3Q9QXN0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Shroom3Q9QXN0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Shroom3Q9QXN0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Shroom3Q9QXN0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Shroom3Q9QXN0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Shroom3Q9QXN0 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Shroom3Q9QXN0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Shroom3Q9QXN0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.47■■□□□ 1.03
Shroom3Q9QXN0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
Shroom3Q9QXN0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.46■■□□□ 1.03
Shroom3Q9QXN0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.46■■□□□ 1.03
Shroom3Q9QXN0 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.46■■□□□ 1.03
Shroom3Q9QXN0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Shroom3Q9QXN0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Shroom3Q9QXN0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Shroom3Q9QXN0 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Shroom3Q9QXN0 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.45■■□□□ 1.02
Shroom3Q9QXN0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.45■■□□□ 1.02
Shroom3Q9QXN0 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Shroom3Q9QXN0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.45■■□□□ 1.02
Shroom3Q9QXN0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Shroom3Q9QXN0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Shroom3Q9QXN0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Shroom3Q9QXN0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Shroom3Q9QXN0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Shroom3Q9QXN0 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.44■■□□□ 1.02
Shroom3Q9QXN0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Shroom3Q9QXN0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Shroom3Q9QXN0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.44■■□□□ 1.02
Shroom3Q9QXN0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.44■■□□□ 1.02
Shroom3Q9QXN0 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.44■■□□□ 1.02
Shroom3Q9QXN0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Shroom3Q9QXN0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.44■■□□□ 1.02
Shroom3Q9QXN0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Shroom3Q9QXN0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Shroom3Q9QXN0 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.43■■□□□ 1.02
Shroom3Q9QXN0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Shroom3Q9QXN0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Shroom3Q9QXN0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Shroom3Q9QXN0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Shroom3Q9QXN0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.43■■□□□ 1.02
Shroom3Q9QXN0 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.43■■□□□ 1.02
Shroom3Q9QXN0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Shroom3Q9QXN0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Shroom3Q9QXN0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Shroom3Q9QXN0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Shroom3Q9QXN0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Shroom3Q9QXN0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Shroom3Q9QXN0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Shroom3Q9QXN0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Shroom3Q9QXN0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Shroom3Q9QXN0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Shroom3Q9QXN0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Shroom3Q9QXN0 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Shroom3Q9QXN0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Shroom3Q9QXN0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Shroom3Q9QXN0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.41■■□□□ 1.02
Shroom3Q9QXN0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Shroom3Q9QXN0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
Shroom3Q9QXN0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Shroom3Q9QXN0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Shroom3Q9QXN0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Shroom3Q9QXN0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms