Protein–RNA interactions for Protein: Q9JMK2

Csnk1e, Casein kinase I isoform epsilon, mousemouse

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1eQ9JMK2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Csnk1eQ9JMK2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Csnk1eQ9JMK2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.78■□□□□ 0.92
Csnk1eQ9JMK2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Csnk1eQ9JMK2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Csnk1eQ9JMK2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Csnk1eQ9JMK2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Csnk1eQ9JMK2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Csnk1eQ9JMK2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Csnk1eQ9JMK2 Serp2-204ENSMUST00000228055 705 ntBASIC20.77■□□□□ 0.92
Csnk1eQ9JMK2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Csnk1eQ9JMK2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Csnk1eQ9JMK2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.77■□□□□ 0.92
Csnk1eQ9JMK2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Csnk1eQ9JMK2 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Csnk1eQ9JMK2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Csnk1eQ9JMK2 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Csnk1eQ9JMK2 Gm27454-201ENSMUST00000185090 204 ntBASIC20.76■□□□□ 0.91
Csnk1eQ9JMK2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
Csnk1eQ9JMK2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Csnk1eQ9JMK2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Csnk1eQ9JMK2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Csnk1eQ9JMK2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Csnk1eQ9JMK2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.75■□□□□ 0.91
Csnk1eQ9JMK2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.75■□□□□ 0.91
Csnk1eQ9JMK2 Golgb1-201ENSMUST00000023534 498 ntBASIC20.75■□□□□ 0.91
Csnk1eQ9JMK2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Csnk1eQ9JMK2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Csnk1eQ9JMK2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Csnk1eQ9JMK2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Csnk1eQ9JMK2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Csnk1eQ9JMK2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Csnk1eQ9JMK2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.74■□□□□ 0.91
Csnk1eQ9JMK2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Csnk1eQ9JMK2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Csnk1eQ9JMK2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Csnk1eQ9JMK2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Csnk1eQ9JMK2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Csnk1eQ9JMK2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.73■□□□□ 0.91
Csnk1eQ9JMK2 Gm45417-201ENSMUST00000209533 758 ntBASIC20.73■□□□□ 0.91
Csnk1eQ9JMK2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Csnk1eQ9JMK2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Csnk1eQ9JMK2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Csnk1eQ9JMK2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Csnk1eQ9JMK2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Csnk1eQ9JMK2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Csnk1eQ9JMK2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
Csnk1eQ9JMK2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.72■□□□□ 0.91
Csnk1eQ9JMK2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.72■□□□□ 0.91
Csnk1eQ9JMK2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Csnk1eQ9JMK2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Csnk1eQ9JMK2 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Csnk1eQ9JMK2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Csnk1eQ9JMK2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Csnk1eQ9JMK2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Csnk1eQ9JMK2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.71■□□□□ 0.91
Csnk1eQ9JMK2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Csnk1eQ9JMK2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Csnk1eQ9JMK2 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Csnk1eQ9JMK2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Csnk1eQ9JMK2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Csnk1eQ9JMK2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.7■□□□□ 0.9
Csnk1eQ9JMK2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.7■□□□□ 0.9
Csnk1eQ9JMK2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Csnk1eQ9JMK2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Csnk1eQ9JMK2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Csnk1eQ9JMK2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Csnk1eQ9JMK2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Csnk1eQ9JMK2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Csnk1eQ9JMK2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.68■□□□□ 0.9
Csnk1eQ9JMK2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Csnk1eQ9JMK2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Csnk1eQ9JMK2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
Csnk1eQ9JMK2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Csnk1eQ9JMK2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Csnk1eQ9JMK2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Csnk1eQ9JMK2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Csnk1eQ9JMK2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Csnk1eQ9JMK2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Csnk1eQ9JMK2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Csnk1eQ9JMK2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.67■□□□□ 0.9
Csnk1eQ9JMK2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.67■□□□□ 0.9
Csnk1eQ9JMK2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Csnk1eQ9JMK2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Csnk1eQ9JMK2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.67■□□□□ 0.9
Csnk1eQ9JMK2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Csnk1eQ9JMK2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Csnk1eQ9JMK2 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Csnk1eQ9JMK2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Csnk1eQ9JMK2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Csnk1eQ9JMK2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Csnk1eQ9JMK2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Csnk1eQ9JMK2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Csnk1eQ9JMK2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Csnk1eQ9JMK2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.65■□□□□ 0.9
Csnk1eQ9JMK2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Csnk1eQ9JMK2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Csnk1eQ9JMK2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Csnk1eQ9JMK2 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Csnk1eQ9JMK2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms