Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rbfox1Q9JJ43 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rbfox1Q9JJ43 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rbfox1Q9JJ43 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rbfox1Q9JJ43 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rbfox1Q9JJ43 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rbfox1Q9JJ43 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rbfox1Q9JJ43 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rbfox1Q9JJ43 Gm11687-201ENSMUST00000118911 886 ntBASIC18.1■□□□□ 0.49
Rbfox1Q9JJ43 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.1■□□□□ 0.49
Rbfox1Q9JJ43 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rbfox1Q9JJ43 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rbfox1Q9JJ43 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rbfox1Q9JJ43 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rbfox1Q9JJ43 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rbfox1Q9JJ43 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Rbfox1Q9JJ43 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.09■□□□□ 0.49
Rbfox1Q9JJ43 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rbfox1Q9JJ43 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rbfox1Q9JJ43 Gm16437-201ENSMUST00000025669 507 ntBASIC18.09■□□□□ 0.49
Rbfox1Q9JJ43 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Rbfox1Q9JJ43 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Rbfox1Q9JJ43 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rbfox1Q9JJ43 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rbfox1Q9JJ43 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rbfox1Q9JJ43 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Rbfox1Q9JJ43 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rbfox1Q9JJ43 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Rbfox1Q9JJ43 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rbfox1Q9JJ43 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rbfox1Q9JJ43 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.08■□□□□ 0.48
Rbfox1Q9JJ43 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rbfox1Q9JJ43 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rbfox1Q9JJ43 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rbfox1Q9JJ43 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rbfox1Q9JJ43 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rbfox1Q9JJ43 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rbfox1Q9JJ43 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rbfox1Q9JJ43 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rbfox1Q9JJ43 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rbfox1Q9JJ43 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.06■□□□□ 0.48
Rbfox1Q9JJ43 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rbfox1Q9JJ43 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rbfox1Q9JJ43 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rbfox1Q9JJ43 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rbfox1Q9JJ43 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rbfox1Q9JJ43 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rbfox1Q9JJ43 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rbfox1Q9JJ43 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rbfox1Q9JJ43 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rbfox1Q9JJ43 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rbfox1Q9JJ43 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rbfox1Q9JJ43 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rbfox1Q9JJ43 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Rbfox1Q9JJ43 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rbfox1Q9JJ43 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rbfox1Q9JJ43 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rbfox1Q9JJ43 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rbfox1Q9JJ43 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rbfox1Q9JJ43 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rbfox1Q9JJ43 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rbfox1Q9JJ43 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rbfox1Q9JJ43 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rbfox1Q9JJ43 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rbfox1Q9JJ43 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Rbfox1Q9JJ43 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rbfox1Q9JJ43 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Rbfox1Q9JJ43 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rbfox1Q9JJ43 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rbfox1Q9JJ43 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rbfox1Q9JJ43 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rbfox1Q9JJ43 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Rbfox1Q9JJ43 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rbfox1Q9JJ43 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rbfox1Q9JJ43 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Rbfox1Q9JJ43 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rbfox1Q9JJ43 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rbfox1Q9JJ43 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rbfox1Q9JJ43 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rbfox1Q9JJ43 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rbfox1Q9JJ43 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rbfox1Q9JJ43 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rbfox1Q9JJ43 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rbfox1Q9JJ43 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Rbfox1Q9JJ43 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rbfox1Q9JJ43 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rbfox1Q9JJ43 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.01■□□□□ 0.47
Rbfox1Q9JJ43 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rbfox1Q9JJ43 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.01■□□□□ 0.47
Rbfox1Q9JJ43 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Rbfox1Q9JJ43 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rbfox1Q9JJ43 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rbfox1Q9JJ43 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rbfox1Q9JJ43 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rbfox1Q9JJ43 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rbfox1Q9JJ43 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rbfox1Q9JJ43 Gm12504-201ENSMUST00000120860 2231 ntBASIC18■□□□□ 0.47
Rbfox1Q9JJ43 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rbfox1Q9JJ43 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rbfox1Q9JJ43 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms