Protein–RNA interactions for Protein: Q9D9V4

Rsph9, Radial spoke head protein 9 homolog, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph9Q9D9V4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rsph9Q9D9V4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.85■□□□□ 0.93
Rsph9Q9D9V4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rsph9Q9D9V4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rsph9Q9D9V4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rsph9Q9D9V4 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rsph9Q9D9V4 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
Rsph9Q9D9V4 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.84■□□□□ 0.93
Rsph9Q9D9V4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Rsph9Q9D9V4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rsph9Q9D9V4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rsph9Q9D9V4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rsph9Q9D9V4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Rsph9Q9D9V4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rsph9Q9D9V4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Rsph9Q9D9V4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.83■□□□□ 0.93
Rsph9Q9D9V4 Gm7417-201ENSMUST00000192950 473 ntBASIC20.83■□□□□ 0.93
Rsph9Q9D9V4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.83■□□□□ 0.93
Rsph9Q9D9V4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.83■□□□□ 0.93
Rsph9Q9D9V4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Rsph9Q9D9V4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rsph9Q9D9V4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rsph9Q9D9V4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rsph9Q9D9V4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rsph9Q9D9V4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rsph9Q9D9V4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.82■□□□□ 0.92
Rsph9Q9D9V4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Rsph9Q9D9V4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.82■□□□□ 0.92
Rsph9Q9D9V4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rsph9Q9D9V4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rsph9Q9D9V4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rsph9Q9D9V4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rsph9Q9D9V4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.81■□□□□ 0.92
Rsph9Q9D9V4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rsph9Q9D9V4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rsph9Q9D9V4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rsph9Q9D9V4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rsph9Q9D9V4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rsph9Q9D9V4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
Rsph9Q9D9V4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rsph9Q9D9V4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rsph9Q9D9V4 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.79■□□□□ 0.92
Rsph9Q9D9V4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.79■□□□□ 0.92
Rsph9Q9D9V4 Gm40881-201ENSMUST00000223397 166 ntBASIC20.79■□□□□ 0.92
Rsph9Q9D9V4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rsph9Q9D9V4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rsph9Q9D9V4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rsph9Q9D9V4 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rsph9Q9D9V4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.78■□□□□ 0.92
Rsph9Q9D9V4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.78■□□□□ 0.92
Rsph9Q9D9V4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rsph9Q9D9V4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rsph9Q9D9V4 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rsph9Q9D9V4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rsph9Q9D9V4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rsph9Q9D9V4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rsph9Q9D9V4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rsph9Q9D9V4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.77■□□□□ 0.92
Rsph9Q9D9V4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rsph9Q9D9V4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rsph9Q9D9V4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.77■□□□□ 0.92
Rsph9Q9D9V4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.77■□□□□ 0.91
Rsph9Q9D9V4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rsph9Q9D9V4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rsph9Q9D9V4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rsph9Q9D9V4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.76■□□□□ 0.91
Rsph9Q9D9V4 Gm10399-202ENSMUST00000202768 748 ntBASIC20.76■□□□□ 0.91
Rsph9Q9D9V4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rsph9Q9D9V4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rsph9Q9D9V4 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rsph9Q9D9V4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.75■□□□□ 0.91
Rsph9Q9D9V4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.75■□□□□ 0.91
Rsph9Q9D9V4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rsph9Q9D9V4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.75■□□□□ 0.91
Rsph9Q9D9V4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
Rsph9Q9D9V4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rsph9Q9D9V4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Rsph9Q9D9V4 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Rsph9Q9D9V4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rsph9Q9D9V4 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.75■□□□□ 0.91
Rsph9Q9D9V4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rsph9Q9D9V4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.74■□□□□ 0.91
Rsph9Q9D9V4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.74■□□□□ 0.91
Rsph9Q9D9V4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Rsph9Q9D9V4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rsph9Q9D9V4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rsph9Q9D9V4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rsph9Q9D9V4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rsph9Q9D9V4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rsph9Q9D9V4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rsph9Q9D9V4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rsph9Q9D9V4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rsph9Q9D9V4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rsph9Q9D9V4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rsph9Q9D9V4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.72■□□□□ 0.91
Rsph9Q9D9V4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rsph9Q9D9V4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rsph9Q9D9V4 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rsph9Q9D9V4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rsph9Q9D9V4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms