Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh2d4aQ9D7V1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh2d4aQ9D7V1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Sh2d4aQ9D7V1 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh2d4aQ9D7V1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2d4aQ9D7V1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2d4aQ9D7V1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Sh2d4aQ9D7V1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.51■□□□□ 0.87
Sh2d4aQ9D7V1 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.51■□□□□ 0.87
Sh2d4aQ9D7V1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2d4aQ9D7V1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.51■□□□□ 0.87
Sh2d4aQ9D7V1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.51■□□□□ 0.87
Sh2d4aQ9D7V1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2d4aQ9D7V1 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.5■□□□□ 0.87
Sh2d4aQ9D7V1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Sh2d4aQ9D7V1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh2d4aQ9D7V1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Sh2d4aQ9D7V1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh2d4aQ9D7V1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh2d4aQ9D7V1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Sh2d4aQ9D7V1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh2d4aQ9D7V1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh2d4aQ9D7V1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sh2d4aQ9D7V1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh2d4aQ9D7V1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh2d4aQ9D7V1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Sh2d4aQ9D7V1 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.49■□□□□ 0.87
Sh2d4aQ9D7V1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh2d4aQ9D7V1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh2d4aQ9D7V1 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Sh2d4aQ9D7V1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d4aQ9D7V1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d4aQ9D7V1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d4aQ9D7V1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d4aQ9D7V1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d4aQ9D7V1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.48■□□□□ 0.87
Sh2d4aQ9D7V1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d4aQ9D7V1 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d4aQ9D7V1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d4aQ9D7V1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d4aQ9D7V1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d4aQ9D7V1 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d4aQ9D7V1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sh2d4aQ9D7V1 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Sh2d4aQ9D7V1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sh2d4aQ9D7V1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.47■□□□□ 0.87
Sh2d4aQ9D7V1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh2d4aQ9D7V1 Gm44428-201ENSMUST00000204474 874 ntBASIC20.47■□□□□ 0.87
Sh2d4aQ9D7V1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh2d4aQ9D7V1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Sh2d4aQ9D7V1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sh2d4aQ9D7V1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2d4aQ9D7V1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.46■□□□□ 0.87
Sh2d4aQ9D7V1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2d4aQ9D7V1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.46■□□□□ 0.87
Sh2d4aQ9D7V1 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.46■□□□□ 0.87
Sh2d4aQ9D7V1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2d4aQ9D7V1 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.46■□□□□ 0.87
Sh2d4aQ9D7V1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sh2d4aQ9D7V1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
Sh2d4aQ9D7V1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh2d4aQ9D7V1 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.45■□□□□ 0.86
Sh2d4aQ9D7V1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sh2d4aQ9D7V1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh2d4aQ9D7V1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sh2d4aQ9D7V1 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Sh2d4aQ9D7V1 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.44■□□□□ 0.86
Sh2d4aQ9D7V1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Sh2d4aQ9D7V1 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sh2d4aQ9D7V1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sh2d4aQ9D7V1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sh2d4aQ9D7V1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sh2d4aQ9D7V1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sh2d4aQ9D7V1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sh2d4aQ9D7V1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sh2d4aQ9D7V1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.43■□□□□ 0.86
Sh2d4aQ9D7V1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh2d4aQ9D7V1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh2d4aQ9D7V1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh2d4aQ9D7V1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.42■□□□□ 0.86
Sh2d4aQ9D7V1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.42■□□□□ 0.86
Sh2d4aQ9D7V1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.42■□□□□ 0.86
Sh2d4aQ9D7V1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh2d4aQ9D7V1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sh2d4aQ9D7V1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2d4aQ9D7V1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2d4aQ9D7V1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Sh2d4aQ9D7V1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Sh2d4aQ9D7V1 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sh2d4aQ9D7V1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Sh2d4aQ9D7V1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Sh2d4aQ9D7V1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Sh2d4aQ9D7V1 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
Sh2d4aQ9D7V1 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sh2d4aQ9D7V1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.4■□□□□ 0.86
Sh2d4aQ9D7V1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sh2d4aQ9D7V1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sh2d4aQ9D7V1 Gm6311-201ENSMUST00000073790 878 ntBASIC20.4■□□□□ 0.86
Sh2d4aQ9D7V1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sh2d4aQ9D7V1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms