Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.71■□□□□ 0.59
Tmem54Q9D7S1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Tmem54Q9D7S1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmem54Q9D7S1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmem54Q9D7S1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmem54Q9D7S1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmem54Q9D7S1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmem54Q9D7S1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Tmem54Q9D7S1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.7■□□□□ 0.58
Tmem54Q9D7S1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.7■□□□□ 0.58
Tmem54Q9D7S1 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmem54Q9D7S1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Tmem54Q9D7S1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tmem54Q9D7S1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tmem54Q9D7S1 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tmem54Q9D7S1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tmem54Q9D7S1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tmem54Q9D7S1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tmem54Q9D7S1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Tmem54Q9D7S1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tmem54Q9D7S1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tmem54Q9D7S1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tmem54Q9D7S1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tmem54Q9D7S1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmem54Q9D7S1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmem54Q9D7S1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmem54Q9D7S1 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.68■□□□□ 0.58
Tmem54Q9D7S1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Tmem54Q9D7S1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Tmem54Q9D7S1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tmem54Q9D7S1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmem54Q9D7S1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tmem54Q9D7S1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.67■□□□□ 0.58
Tmem54Q9D7S1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmem54Q9D7S1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Tmem54Q9D7S1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tmem54Q9D7S1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tmem54Q9D7S1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.67■□□□□ 0.58
Tmem54Q9D7S1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Tmem54Q9D7S1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tmem54Q9D7S1 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.66■□□□□ 0.58
Tmem54Q9D7S1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Tmem54Q9D7S1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tmem54Q9D7S1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Tmem54Q9D7S1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tmem54Q9D7S1 Gm5812-201ENSMUST00000061073 957 ntBASIC18.66■□□□□ 0.58
Tmem54Q9D7S1 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tmem54Q9D7S1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.66■□□□□ 0.58
Tmem54Q9D7S1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Tmem54Q9D7S1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tmem54Q9D7S1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.66■□□□□ 0.58
Tmem54Q9D7S1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tmem54Q9D7S1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.65■□□□□ 0.58
Tmem54Q9D7S1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tmem54Q9D7S1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Tmem54Q9D7S1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Tmem54Q9D7S1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tmem54Q9D7S1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tmem54Q9D7S1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Tmem54Q9D7S1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Tmem54Q9D7S1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tmem54Q9D7S1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tmem54Q9D7S1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.64■□□□□ 0.57
Tmem54Q9D7S1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.64■□□□□ 0.57
Tmem54Q9D7S1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Tmem54Q9D7S1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Tmem54Q9D7S1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tmem54Q9D7S1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tmem54Q9D7S1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tmem54Q9D7S1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tmem54Q9D7S1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tmem54Q9D7S1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tmem54Q9D7S1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tmem54Q9D7S1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Tmem54Q9D7S1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tmem54Q9D7S1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Tmem54Q9D7S1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tmem54Q9D7S1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tmem54Q9D7S1 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.63■□□□□ 0.57
Tmem54Q9D7S1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem54Q9D7S1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Tmem54Q9D7S1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem54Q9D7S1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem54Q9D7S1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem54Q9D7S1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tmem54Q9D7S1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.62■□□□□ 0.57
Tmem54Q9D7S1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tmem54Q9D7S1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmem54Q9D7S1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.61■□□□□ 0.57
Tmem54Q9D7S1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmem54Q9D7S1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Tmem54Q9D7S1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmem54Q9D7S1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tmem54Q9D7S1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.6■□□□□ 0.57
Tmem54Q9D7S1 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmem54Q9D7S1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tmem54Q9D7S1 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tmem54Q9D7S1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.6■□□□□ 0.57
Tmem54Q9D7S1 Gm10232-201ENSMUST00000089221 720 ntBASIC18.6■□□□□ 0.57
Tmem54Q9D7S1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms