Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx47Q9CWX9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx47Q9CWX9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx47Q9CWX9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Ddx47Q9CWX9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.9■■□□□ 1.1
Ddx47Q9CWX9 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ddx47Q9CWX9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.1
Ddx47Q9CWX9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ddx47Q9CWX9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ddx47Q9CWX9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx47Q9CWX9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx47Q9CWX9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Ddx47Q9CWX9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx47Q9CWX9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx47Q9CWX9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx47Q9CWX9 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.88■■□□□ 1.09
Ddx47Q9CWX9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx47Q9CWX9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx47Q9CWX9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx47Q9CWX9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ddx47Q9CWX9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.88■■□□□ 1.09
Ddx47Q9CWX9 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx47Q9CWX9 Iqck-206ENSMUST00000208658 2891 ntBASIC21.87■■□□□ 1.09
Ddx47Q9CWX9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx47Q9CWX9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx47Q9CWX9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx47Q9CWX9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Ddx47Q9CWX9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Ddx47Q9CWX9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx47Q9CWX9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx47Q9CWX9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.86■■□□□ 1.09
Ddx47Q9CWX9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx47Q9CWX9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
Ddx47Q9CWX9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ddx47Q9CWX9 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.86■■□□□ 1.09
Ddx47Q9CWX9 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.86■■□□□ 1.09
Ddx47Q9CWX9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx47Q9CWX9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx47Q9CWX9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Ddx47Q9CWX9 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx47Q9CWX9 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.85■■□□□ 1.09
Ddx47Q9CWX9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.85■■□□□ 1.09
Ddx47Q9CWX9 Terc-201ENSMUST00000082862 423 ntBASIC21.85■■□□□ 1.09
Ddx47Q9CWX9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx47Q9CWX9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ddx47Q9CWX9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.84■■□□□ 1.09
Ddx47Q9CWX9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx47Q9CWX9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx47Q9CWX9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ddx47Q9CWX9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ddx47Q9CWX9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Ddx47Q9CWX9 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.83■■□□□ 1.09
Ddx47Q9CWX9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ddx47Q9CWX9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.83■■□□□ 1.09
Ddx47Q9CWX9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.83■■□□□ 1.09
Ddx47Q9CWX9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Ddx47Q9CWX9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Ddx47Q9CWX9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ddx47Q9CWX9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx47Q9CWX9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx47Q9CWX9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Ddx47Q9CWX9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.82■■□□□ 1.08
Ddx47Q9CWX9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ddx47Q9CWX9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Ddx47Q9CWX9 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.81■■□□□ 1.08
Ddx47Q9CWX9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx47Q9CWX9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Ddx47Q9CWX9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ddx47Q9CWX9 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.8■■□□□ 1.08
Ddx47Q9CWX9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx47Q9CWX9 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx47Q9CWX9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx47Q9CWX9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx47Q9CWX9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Ddx47Q9CWX9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ddx47Q9CWX9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Ddx47Q9CWX9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx47Q9CWX9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Ddx47Q9CWX9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx47Q9CWX9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ddx47Q9CWX9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx47Q9CWX9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx47Q9CWX9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx47Q9CWX9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx47Q9CWX9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ddx47Q9CWX9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx47Q9CWX9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx47Q9CWX9 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
Ddx47Q9CWX9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.77■■□□□ 1.08
Ddx47Q9CWX9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ddx47Q9CWX9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.77■■□□□ 1.08
Ddx47Q9CWX9 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.77■■□□□ 1.07
Ddx47Q9CWX9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ddx47Q9CWX9 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx47Q9CWX9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ddx47Q9CWX9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Ddx47Q9CWX9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.76■■□□□ 1.07
Ddx47Q9CWX9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Ddx47Q9CWX9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
Ddx47Q9CWX9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms