Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.58■□□□□ 0.73
Q9CR55 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q9CR55 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.57■□□□□ 0.72
Q9CR55 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
Q9CR55 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.57■□□□□ 0.72
Q9CR55 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.57■□□□□ 0.72
Q9CR55 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q9CR55 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Q9CR55 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Q9CR55 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Q9CR55 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Q9CR55 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Q9CR55 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Q9CR55 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Q9CR55 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Q9CR55 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q9CR55 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Q9CR55 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q9CR55 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q9CR55 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q9CR55 Golph3-202ENSMUST00000226517 2359 ntBASIC19.55■□□□□ 0.72
Q9CR55 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q9CR55 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.54■□□□□ 0.72
Q9CR55 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
Q9CR55 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q9CR55 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q9CR55 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Q9CR55 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q9CR55 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q9CR55 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Q9CR55 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Q9CR55 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q9CR55 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q9CR55 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Q9CR55 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q9CR55 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Q9CR55 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Q9CR55 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Q9CR55 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.52■□□□□ 0.72
Q9CR55 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.52■□□□□ 0.72
Q9CR55 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Q9CR55 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Q9CR55 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Q9CR55 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Q9CR55 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Q9CR55 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Q9CR55 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Q9CR55 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Q9CR55 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Q9CR55 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Q9CR55 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.51■□□□□ 0.71
Q9CR55 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Q9CR55 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Q9CR55 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Q9CR55 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Q9CR55 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Q9CR55 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Q9CR55 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Q9CR55 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Q9CR55 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q9CR55 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q9CR55 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Q9CR55 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q9CR55 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Q9CR55 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q9CR55 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Q9CR55 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q9CR55 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Q9CR55 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.48■□□□□ 0.71
Q9CR55 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Q9CR55 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Q9CR55 Nkain2-201ENSMUST00000092602 558 ntBASIC19.48■□□□□ 0.71
Q9CR55 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Q9CR55 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Q9CR55 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q9CR55 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q9CR55 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q9CR55 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q9CR55 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q9CR55 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q9CR55 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q9CR55 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Q9CR55 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q9CR55 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Q9CR55 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q9CR55 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Q9CR55 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q9CR55 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q9CR55 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Q9CR55 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q9CR55 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q9CR55 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Q9CR55 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.46■□□□□ 0.71
Q9CR55 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Q9CR55 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Q9CR55 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Q9CR55 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Q9CR55 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Q9CR55 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.45■□□□□ 0.7
Q9CR55 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms