Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Nkx6-1Q99MA9 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nkx6-1Q99MA9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Nkx6-1Q99MA9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkx6-1Q99MA9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nkx6-1Q99MA9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.09■□□□□ 0.81
Nkx6-1Q99MA9 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkx6-1Q99MA9 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Nkx6-1Q99MA9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkx6-1Q99MA9 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkx6-1Q99MA9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nkx6-1Q99MA9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nkx6-1Q99MA9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nkx6-1Q99MA9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nkx6-1Q99MA9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.08■□□□□ 0.81
Nkx6-1Q99MA9 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nkx6-1Q99MA9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nkx6-1Q99MA9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nkx6-1Q99MA9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nkx6-1Q99MA9 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx6-1Q99MA9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.07■□□□□ 0.8
Nkx6-1Q99MA9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.07■□□□□ 0.8
Nkx6-1Q99MA9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx6-1Q99MA9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx6-1Q99MA9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx6-1Q99MA9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.07■□□□□ 0.8
Nkx6-1Q99MA9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nkx6-1Q99MA9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx6-1Q99MA9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.06■□□□□ 0.8
Nkx6-1Q99MA9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.06■□□□□ 0.8
Nkx6-1Q99MA9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.06■□□□□ 0.8
Nkx6-1Q99MA9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nkx6-1Q99MA9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Nkx6-1Q99MA9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Nkx6-1Q99MA9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx6-1Q99MA9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.05■□□□□ 0.8
Nkx6-1Q99MA9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx6-1Q99MA9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Nkx6-1Q99MA9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.05■□□□□ 0.8
Nkx6-1Q99MA9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Nkx6-1Q99MA9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx6-1Q99MA9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nkx6-1Q99MA9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx6-1Q99MA9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.04■□□□□ 0.8
Nkx6-1Q99MA9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx6-1Q99MA9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.04■□□□□ 0.8
Nkx6-1Q99MA9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Nkx6-1Q99MA9 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.04■□□□□ 0.8
Nkx6-1Q99MA9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nkx6-1Q99MA9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx6-1Q99MA9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Nkx6-1Q99MA9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx6-1Q99MA9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.03■□□□□ 0.8
Nkx6-1Q99MA9 Gm29257-201ENSMUST00000186115 639 ntBASIC20.03■□□□□ 0.8
Nkx6-1Q99MA9 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.03■□□□□ 0.8
Nkx6-1Q99MA9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nkx6-1Q99MA9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Nkx6-1Q99MA9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx6-1Q99MA9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.02■□□□□ 0.8
Nkx6-1Q99MA9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx6-1Q99MA9 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Nkx6-1Q99MA9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
Nkx6-1Q99MA9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx6-1Q99MA9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Nkx6-1Q99MA9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.02■□□□□ 0.8
Nkx6-1Q99MA9 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.02■□□□□ 0.8
Nkx6-1Q99MA9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx6-1Q99MA9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx6-1Q99MA9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Nkx6-1Q99MA9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.01■□□□□ 0.79
Nkx6-1Q99MA9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.01■□□□□ 0.79
Nkx6-1Q99MA9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx6-1Q99MA9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx6-1Q99MA9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx6-1Q99MA9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx6-1Q99MA9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Nkx6-1Q99MA9 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx6-1Q99MA9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx6-1Q99MA9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nkx6-1Q99MA9 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx6-1Q99MA9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Nkx6-1Q99MA9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nkx6-1Q99MA9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nkx6-1Q99MA9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx6-1Q99MA9 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx6-1Q99MA9 Gm6139-201ENSMUST00000079261 882 ntBASIC20■□□□□ 0.79
Nkx6-1Q99MA9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nkx6-1Q99MA9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nkx6-1Q99MA9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nkx6-1Q99MA9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx6-1Q99MA9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.99■□□□□ 0.79
Nkx6-1Q99MA9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx6-1Q99MA9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx6-1Q99MA9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Nkx6-1Q99MA9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nkx6-1Q99MA9 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.98■□□□□ 0.79
Nkx6-1Q99MA9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx6-1Q99MA9 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx6-1Q99MA9 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Nkx6-1Q99MA9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms