Protein–RNA interactions for Protein: Q99JP6

Homer3, Homer protein homolog 3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Homer3Q99JP6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Homer3Q99JP6 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Homer3Q99JP6 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.18■□□□□ 0.98
Homer3Q99JP6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Homer3Q99JP6 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Homer3Q99JP6 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.18■□□□□ 0.98
Homer3Q99JP6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Homer3Q99JP6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Homer3Q99JP6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Homer3Q99JP6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Homer3Q99JP6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.18■□□□□ 0.98
Homer3Q99JP6 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Homer3Q99JP6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Homer3Q99JP6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Homer3Q99JP6 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Homer3Q99JP6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Homer3Q99JP6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Homer3Q99JP6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Homer3Q99JP6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Homer3Q99JP6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Homer3Q99JP6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Homer3Q99JP6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.16■□□□□ 0.98
Homer3Q99JP6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Homer3Q99JP6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.15■□□□□ 0.98
Homer3Q99JP6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.15■□□□□ 0.98
Homer3Q99JP6 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Homer3Q99JP6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Homer3Q99JP6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Homer3Q99JP6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Homer3Q99JP6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Homer3Q99JP6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Homer3Q99JP6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Homer3Q99JP6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Homer3Q99JP6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Homer3Q99JP6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Homer3Q99JP6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Homer3Q99JP6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Homer3Q99JP6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Homer3Q99JP6 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Homer3Q99JP6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.13■□□□□ 0.97
Homer3Q99JP6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Homer3Q99JP6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Homer3Q99JP6 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Homer3Q99JP6 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Homer3Q99JP6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
Homer3Q99JP6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Homer3Q99JP6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Homer3Q99JP6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Homer3Q99JP6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Homer3Q99JP6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Homer3Q99JP6 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Homer3Q99JP6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Homer3Q99JP6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Homer3Q99JP6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Homer3Q99JP6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Homer3Q99JP6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Homer3Q99JP6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.1■□□□□ 0.97
Homer3Q99JP6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.1■□□□□ 0.97
Homer3Q99JP6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Homer3Q99JP6 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.1■□□□□ 0.97
Homer3Q99JP6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Homer3Q99JP6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
Homer3Q99JP6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Homer3Q99JP6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.1■□□□□ 0.97
Homer3Q99JP6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Homer3Q99JP6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Homer3Q99JP6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Homer3Q99JP6 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Homer3Q99JP6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.09■□□□□ 0.97
Homer3Q99JP6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.09■□□□□ 0.97
Homer3Q99JP6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Homer3Q99JP6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Homer3Q99JP6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Homer3Q99JP6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Homer3Q99JP6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Homer3Q99JP6 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Homer3Q99JP6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Homer3Q99JP6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Homer3Q99JP6 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.08■□□□□ 0.97
Homer3Q99JP6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
Homer3Q99JP6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.08■□□□□ 0.97
Homer3Q99JP6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Homer3Q99JP6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Homer3Q99JP6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Homer3Q99JP6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Homer3Q99JP6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Homer3Q99JP6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Homer3Q99JP6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Homer3Q99JP6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Homer3Q99JP6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Homer3Q99JP6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.07■□□□□ 0.96
Homer3Q99JP6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.07■□□□□ 0.96
Homer3Q99JP6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
Homer3Q99JP6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Homer3Q99JP6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Homer3Q99JP6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Homer3Q99JP6 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Homer3Q99JP6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Homer3Q99JP6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Homer3Q99JP6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms