Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Thumpd1Q99J36 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Thumpd1Q99J36 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Thumpd1Q99J36 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Thumpd1Q99J36 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Thumpd1Q99J36 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Thumpd1Q99J36 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Thumpd1Q99J36 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Thumpd1Q99J36 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Thumpd1Q99J36 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Thumpd1Q99J36 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Thumpd1Q99J36 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Thumpd1Q99J36 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.97■□□□□ 0.63
Thumpd1Q99J36 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Thumpd1Q99J36 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Thumpd1Q99J36 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Thumpd1Q99J36 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Thumpd1Q99J36 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Thumpd1Q99J36 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thumpd1Q99J36 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Thumpd1Q99J36 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thumpd1Q99J36 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
Thumpd1Q99J36 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Thumpd1Q99J36 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Thumpd1Q99J36 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Thumpd1Q99J36 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Thumpd1Q99J36 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.95■□□□□ 0.62
Thumpd1Q99J36 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Thumpd1Q99J36 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Thumpd1Q99J36 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.95■□□□□ 0.62
Thumpd1Q99J36 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Thumpd1Q99J36 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Thumpd1Q99J36 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Thumpd1Q99J36 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.94■□□□□ 0.62
Thumpd1Q99J36 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Thumpd1Q99J36 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Thumpd1Q99J36 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Thumpd1Q99J36 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Thumpd1Q99J36 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Thumpd1Q99J36 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Thumpd1Q99J36 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Thumpd1Q99J36 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Thumpd1Q99J36 Gm7432-201ENSMUST00000210343 879 ntBASIC18.94■□□□□ 0.62
Thumpd1Q99J36 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.94■□□□□ 0.62
Thumpd1Q99J36 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.94■□□□□ 0.62
Thumpd1Q99J36 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Thumpd1Q99J36 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Thumpd1Q99J36 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Thumpd1Q99J36 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Thumpd1Q99J36 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Thumpd1Q99J36 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Thumpd1Q99J36 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Thumpd1Q99J36 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Thumpd1Q99J36 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Thumpd1Q99J36 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Thumpd1Q99J36 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Thumpd1Q99J36 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.92■□□□□ 0.62
Thumpd1Q99J36 Gm44428-201ENSMUST00000204474 874 ntBASIC18.92■□□□□ 0.62
Thumpd1Q99J36 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Thumpd1Q99J36 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Thumpd1Q99J36 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Thumpd1Q99J36 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Thumpd1Q99J36 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Thumpd1Q99J36 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Thumpd1Q99J36 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Thumpd1Q99J36 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Thumpd1Q99J36 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Thumpd1Q99J36 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Thumpd1Q99J36 Gm11599-201ENSMUST00000118720 878 ntBASIC18.9■□□□□ 0.62
Thumpd1Q99J36 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.9■□□□□ 0.62
Thumpd1Q99J36 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Thumpd1Q99J36 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.9■□□□□ 0.62
Thumpd1Q99J36 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Thumpd1Q99J36 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Thumpd1Q99J36 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Thumpd1Q99J36 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Thumpd1Q99J36 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Thumpd1Q99J36 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Thumpd1Q99J36 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Thumpd1Q99J36 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Thumpd1Q99J36 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Thumpd1Q99J36 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.89■□□□□ 0.61
Thumpd1Q99J36 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Thumpd1Q99J36 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Thumpd1Q99J36 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Thumpd1Q99J36 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Thumpd1Q99J36 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
Thumpd1Q99J36 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Thumpd1Q99J36 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Thumpd1Q99J36 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Thumpd1Q99J36 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Thumpd1Q99J36 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Thumpd1Q99J36 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
Thumpd1Q99J36 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Thumpd1Q99J36 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.87■□□□□ 0.61
Thumpd1Q99J36 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.87■□□□□ 0.61
Thumpd1Q99J36 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.87■□□□□ 0.61
Thumpd1Q99J36 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Thumpd1Q99J36 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Thumpd1Q99J36 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms