Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rab40cQ8VHQ4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rab40cQ8VHQ4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab40cQ8VHQ4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab40cQ8VHQ4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.36■□□□□ 0.37
Rab40cQ8VHQ4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.36■□□□□ 0.37
Rab40cQ8VHQ4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab40cQ8VHQ4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab40cQ8VHQ4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.36■□□□□ 0.37
Rab40cQ8VHQ4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.36■□□□□ 0.37
Rab40cQ8VHQ4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab40cQ8VHQ4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab40cQ8VHQ4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab40cQ8VHQ4 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.35■□□□□ 0.37
Rab40cQ8VHQ4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rab40cQ8VHQ4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.35■□□□□ 0.37
Rab40cQ8VHQ4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Rab40cQ8VHQ4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab40cQ8VHQ4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab40cQ8VHQ4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rab40cQ8VHQ4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab40cQ8VHQ4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.34■□□□□ 0.37
Rab40cQ8VHQ4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab40cQ8VHQ4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab40cQ8VHQ4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab40cQ8VHQ4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab40cQ8VHQ4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
Rab40cQ8VHQ4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab40cQ8VHQ4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab40cQ8VHQ4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
Rab40cQ8VHQ4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab40cQ8VHQ4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab40cQ8VHQ4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rab40cQ8VHQ4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab40cQ8VHQ4 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab40cQ8VHQ4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rab40cQ8VHQ4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab40cQ8VHQ4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab40cQ8VHQ4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab40cQ8VHQ4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.31■□□□□ 0.36
Rab40cQ8VHQ4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab40cQ8VHQ4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab40cQ8VHQ4 Mir3960-201ENSMUST00000198213 73 ntBASIC17.31■□□□□ 0.36
Rab40cQ8VHQ4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab40cQ8VHQ4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab40cQ8VHQ4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab40cQ8VHQ4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab40cQ8VHQ4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab40cQ8VHQ4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rab40cQ8VHQ4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.3■□□□□ 0.36
Rab40cQ8VHQ4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab40cQ8VHQ4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab40cQ8VHQ4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rab40cQ8VHQ4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rab40cQ8VHQ4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rab40cQ8VHQ4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rab40cQ8VHQ4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab40cQ8VHQ4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Rab40cQ8VHQ4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab40cQ8VHQ4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab40cQ8VHQ4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
Rab40cQ8VHQ4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab40cQ8VHQ4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab40cQ8VHQ4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab40cQ8VHQ4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rab40cQ8VHQ4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.28■□□□□ 0.36
Rab40cQ8VHQ4 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.28■□□□□ 0.36
Rab40cQ8VHQ4 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab40cQ8VHQ4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab40cQ8VHQ4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab40cQ8VHQ4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab40cQ8VHQ4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab40cQ8VHQ4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab40cQ8VHQ4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rab40cQ8VHQ4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rab40cQ8VHQ4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Rab40cQ8VHQ4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rab40cQ8VHQ4 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Rab40cQ8VHQ4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rab40cQ8VHQ4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab40cQ8VHQ4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rab40cQ8VHQ4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab40cQ8VHQ4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Rab40cQ8VHQ4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab40cQ8VHQ4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab40cQ8VHQ4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab40cQ8VHQ4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab40cQ8VHQ4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab40cQ8VHQ4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab40cQ8VHQ4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Rab40cQ8VHQ4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Rab40cQ8VHQ4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab40cQ8VHQ4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rab40cQ8VHQ4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab40cQ8VHQ4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rab40cQ8VHQ4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab40cQ8VHQ4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab40cQ8VHQ4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab40cQ8VHQ4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rab40cQ8VHQ4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms