Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rab40bQ8VHP8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rab40bQ8VHP8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Rab40bQ8VHP8 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab40bQ8VHP8 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab40bQ8VHP8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rab40bQ8VHP8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab40bQ8VHP8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab40bQ8VHP8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rab40bQ8VHP8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab40bQ8VHP8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab40bQ8VHP8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rab40bQ8VHP8 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rab40bQ8VHP8 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.15■□□□□ 0.66
Rab40bQ8VHP8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab40bQ8VHP8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab40bQ8VHP8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Rab40bQ8VHP8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab40bQ8VHP8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rab40bQ8VHP8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rab40bQ8VHP8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Rab40bQ8VHP8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rab40bQ8VHP8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.14■□□□□ 0.65
Rab40bQ8VHP8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rab40bQ8VHP8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rab40bQ8VHP8 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab40bQ8VHP8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rab40bQ8VHP8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab40bQ8VHP8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.13■□□□□ 0.65
Rab40bQ8VHP8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.13■□□□□ 0.65
Rab40bQ8VHP8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Rab40bQ8VHP8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab40bQ8VHP8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab40bQ8VHP8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rab40bQ8VHP8 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rab40bQ8VHP8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rab40bQ8VHP8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rab40bQ8VHP8 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab40bQ8VHP8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rab40bQ8VHP8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab40bQ8VHP8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rab40bQ8VHP8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab40bQ8VHP8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rab40bQ8VHP8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab40bQ8VHP8 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab40bQ8VHP8 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.11■□□□□ 0.65
Rab40bQ8VHP8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rab40bQ8VHP8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rab40bQ8VHP8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rab40bQ8VHP8 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rab40bQ8VHP8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rab40bQ8VHP8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Rab40bQ8VHP8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rab40bQ8VHP8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rab40bQ8VHP8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rab40bQ8VHP8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.09■□□□□ 0.65
Rab40bQ8VHP8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rab40bQ8VHP8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rab40bQ8VHP8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rab40bQ8VHP8 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.08■□□□□ 0.64
Rab40bQ8VHP8 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rab40bQ8VHP8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rab40bQ8VHP8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rab40bQ8VHP8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Rab40bQ8VHP8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rab40bQ8VHP8 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rab40bQ8VHP8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rab40bQ8VHP8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.07■□□□□ 0.64
Rab40bQ8VHP8 Gm7432-201ENSMUST00000210343 879 ntBASIC19.07■□□□□ 0.64
Rab40bQ8VHP8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rab40bQ8VHP8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rab40bQ8VHP8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.07■□□□□ 0.64
Rab40bQ8VHP8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.06■□□□□ 0.64
Rab40bQ8VHP8 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Rab40bQ8VHP8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.06■□□□□ 0.64
Rab40bQ8VHP8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab40bQ8VHP8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab40bQ8VHP8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab40bQ8VHP8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rab40bQ8VHP8 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab40bQ8VHP8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab40bQ8VHP8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab40bQ8VHP8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab40bQ8VHP8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Rab40bQ8VHP8 Gm44428-201ENSMUST00000204474 874 ntBASIC19.05■□□□□ 0.64
Rab40bQ8VHP8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.05■□□□□ 0.64
Rab40bQ8VHP8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rab40bQ8VHP8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab40bQ8VHP8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab40bQ8VHP8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rab40bQ8VHP8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Rab40bQ8VHP8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab40bQ8VHP8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rab40bQ8VHP8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rab40bQ8VHP8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rab40bQ8VHP8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rab40bQ8VHP8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rab40bQ8VHP8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Rab40bQ8VHP8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rab40bQ8VHP8 Gm11599-201ENSMUST00000118720 878 ntBASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms