Protein–RNA interactions for Protein: Q8VE37

Rcc1, Regulator of chromosome condensation, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcc1Q8VE37 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rcc1Q8VE37 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rcc1Q8VE37 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.3■□□□□ 0.52
Rcc1Q8VE37 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rcc1Q8VE37 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rcc1Q8VE37 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rcc1Q8VE37 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rcc1Q8VE37 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rcc1Q8VE37 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.3■□□□□ 0.52
Rcc1Q8VE37 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.29■□□□□ 0.52
Rcc1Q8VE37 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
Rcc1Q8VE37 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rcc1Q8VE37 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rcc1Q8VE37 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Rcc1Q8VE37 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rcc1Q8VE37 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rcc1Q8VE37 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.28■□□□□ 0.52
Rcc1Q8VE37 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rcc1Q8VE37 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rcc1Q8VE37 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Rcc1Q8VE37 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rcc1Q8VE37 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rcc1Q8VE37 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rcc1Q8VE37 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rcc1Q8VE37 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rcc1Q8VE37 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Rcc1Q8VE37 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.27■□□□□ 0.52
Rcc1Q8VE37 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Rcc1Q8VE37 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rcc1Q8VE37 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rcc1Q8VE37 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Rcc1Q8VE37 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Rcc1Q8VE37 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rcc1Q8VE37 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Rcc1Q8VE37 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rcc1Q8VE37 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
Rcc1Q8VE37 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Rcc1Q8VE37 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rcc1Q8VE37 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rcc1Q8VE37 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rcc1Q8VE37 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rcc1Q8VE37 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rcc1Q8VE37 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rcc1Q8VE37 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rcc1Q8VE37 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rcc1Q8VE37 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rcc1Q8VE37 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rcc1Q8VE37 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rcc1Q8VE37 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.25■□□□□ 0.51
Rcc1Q8VE37 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rcc1Q8VE37 Gm11175-201ENSMUST00000116172 543 ntBASIC18.25■□□□□ 0.51
Rcc1Q8VE37 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Rcc1Q8VE37 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rcc1Q8VE37 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rcc1Q8VE37 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rcc1Q8VE37 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rcc1Q8VE37 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Rcc1Q8VE37 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rcc1Q8VE37 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rcc1Q8VE37 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rcc1Q8VE37 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rcc1Q8VE37 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rcc1Q8VE37 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.24■□□□□ 0.51
Rcc1Q8VE37 Gm27502-201ENSMUST00000183495 199 ntBASIC18.24■□□□□ 0.51
Rcc1Q8VE37 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rcc1Q8VE37 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.24■□□□□ 0.51
Rcc1Q8VE37 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.23■□□□□ 0.51
Rcc1Q8VE37 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rcc1Q8VE37 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.23■□□□□ 0.51
Rcc1Q8VE37 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rcc1Q8VE37 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Rcc1Q8VE37 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rcc1Q8VE37 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rcc1Q8VE37 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rcc1Q8VE37 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rcc1Q8VE37 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rcc1Q8VE37 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.22■□□□□ 0.51
Rcc1Q8VE37 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rcc1Q8VE37 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rcc1Q8VE37 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rcc1Q8VE37 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rcc1Q8VE37 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.21■□□□□ 0.51
Rcc1Q8VE37 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rcc1Q8VE37 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rcc1Q8VE37 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rcc1Q8VE37 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rcc1Q8VE37 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rcc1Q8VE37 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rcc1Q8VE37 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rcc1Q8VE37 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rcc1Q8VE37 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rcc1Q8VE37 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rcc1Q8VE37 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rcc1Q8VE37 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rcc1Q8VE37 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.2■□□□□ 0.5
Rcc1Q8VE37 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rcc1Q8VE37 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rcc1Q8VE37 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rcc1Q8VE37 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rcc1Q8VE37 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms