Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx39aQ8VDW0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Ddx39aQ8VDW0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx39aQ8VDW0 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx39aQ8VDW0 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC23.76■■□□□ 1.39
Ddx39aQ8VDW0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx39aQ8VDW0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx39aQ8VDW0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ddx39aQ8VDW0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Ddx39aQ8VDW0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx39aQ8VDW0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx39aQ8VDW0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC23.75■■□□□ 1.39
Ddx39aQ8VDW0 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Ddx39aQ8VDW0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ddx39aQ8VDW0 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
Ddx39aQ8VDW0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ddx39aQ8VDW0 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.74■■□□□ 1.39
Ddx39aQ8VDW0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx39aQ8VDW0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx39aQ8VDW0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx39aQ8VDW0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Ddx39aQ8VDW0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC23.73■■□□□ 1.39
Ddx39aQ8VDW0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
Ddx39aQ8VDW0 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ddx39aQ8VDW0 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx39aQ8VDW0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx39aQ8VDW0 Gm22238-201ENSMUST00000175222 88 ntBASIC23.72■■□□□ 1.39
Ddx39aQ8VDW0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx39aQ8VDW0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ddx39aQ8VDW0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.71■■□□□ 1.39
Ddx39aQ8VDW0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx39aQ8VDW0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx39aQ8VDW0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx39aQ8VDW0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx39aQ8VDW0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx39aQ8VDW0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx39aQ8VDW0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx39aQ8VDW0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ddx39aQ8VDW0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Ddx39aQ8VDW0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Ddx39aQ8VDW0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx39aQ8VDW0 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx39aQ8VDW0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx39aQ8VDW0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx39aQ8VDW0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx39aQ8VDW0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ddx39aQ8VDW0 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx39aQ8VDW0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx39aQ8VDW0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ddx39aQ8VDW0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.69■■□□□ 1.38
Ddx39aQ8VDW0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Ddx39aQ8VDW0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ddx39aQ8VDW0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx39aQ8VDW0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx39aQ8VDW0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC23.67■■□□□ 1.38
Ddx39aQ8VDW0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx39aQ8VDW0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx39aQ8VDW0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx39aQ8VDW0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx39aQ8VDW0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx39aQ8VDW0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ddx39aQ8VDW0 Gm10620-201ENSMUST00000098379 1332 ntBASIC23.66■■□□□ 1.38
Ddx39aQ8VDW0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx39aQ8VDW0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx39aQ8VDW0 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx39aQ8VDW0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC23.66■■□□□ 1.38
Ddx39aQ8VDW0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx39aQ8VDW0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ddx39aQ8VDW0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Ddx39aQ8VDW0 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC23.65■■□□□ 1.38
Ddx39aQ8VDW0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
Ddx39aQ8VDW0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx39aQ8VDW0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx39aQ8VDW0 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ddx39aQ8VDW0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Ddx39aQ8VDW0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Ddx39aQ8VDW0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ddx39aQ8VDW0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ddx39aQ8VDW0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ddx39aQ8VDW0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.63■■□□□ 1.37
Ddx39aQ8VDW0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Ddx39aQ8VDW0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Ddx39aQ8VDW0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ddx39aQ8VDW0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Ddx39aQ8VDW0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx39aQ8VDW0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx39aQ8VDW0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx39aQ8VDW0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.62■■□□□ 1.37
Ddx39aQ8VDW0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Ddx39aQ8VDW0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
Ddx39aQ8VDW0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx39aQ8VDW0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Ddx39aQ8VDW0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Ddx39aQ8VDW0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Ddx39aQ8VDW0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.61■■□□□ 1.37
Ddx39aQ8VDW0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Ddx39aQ8VDW0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ddx39aQ8VDW0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Ddx39aQ8VDW0 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.61■■□□□ 1.37
Ddx39aQ8VDW0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms