Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpusd1Q8VCZ8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpusd1Q8VCZ8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.54■□□□□ 0.88
Rpusd1Q8VCZ8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpusd1Q8VCZ8 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpusd1Q8VCZ8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpusd1Q8VCZ8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpusd1Q8VCZ8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpusd1Q8VCZ8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rpusd1Q8VCZ8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpusd1Q8VCZ8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpusd1Q8VCZ8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpusd1Q8VCZ8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpusd1Q8VCZ8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpusd1Q8VCZ8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rpusd1Q8VCZ8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpusd1Q8VCZ8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpusd1Q8VCZ8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Rpusd1Q8VCZ8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rpusd1Q8VCZ8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rpusd1Q8VCZ8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpusd1Q8VCZ8 Gm12922-201ENSMUST00000120626 809 ntBASIC20.51■□□□□ 0.87
Rpusd1Q8VCZ8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rpusd1Q8VCZ8 Gm21956-201ENSMUST00000179946 522 ntBASIC20.51■□□□□ 0.87
Rpusd1Q8VCZ8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpusd1Q8VCZ8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rpusd1Q8VCZ8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpusd1Q8VCZ8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpusd1Q8VCZ8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpusd1Q8VCZ8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rpusd1Q8VCZ8 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpusd1Q8VCZ8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpusd1Q8VCZ8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpusd1Q8VCZ8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rpusd1Q8VCZ8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpusd1Q8VCZ8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.48■□□□□ 0.87
Rpusd1Q8VCZ8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.48■□□□□ 0.87
Rpusd1Q8VCZ8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpusd1Q8VCZ8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpusd1Q8VCZ8 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.48■□□□□ 0.87
Rpusd1Q8VCZ8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpusd1Q8VCZ8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpusd1Q8VCZ8 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.48■□□□□ 0.87
Rpusd1Q8VCZ8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpusd1Q8VCZ8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rpusd1Q8VCZ8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Rpusd1Q8VCZ8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rpusd1Q8VCZ8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.47■□□□□ 0.87
Rpusd1Q8VCZ8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.47■□□□□ 0.87
Rpusd1Q8VCZ8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpusd1Q8VCZ8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Rpusd1Q8VCZ8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpusd1Q8VCZ8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.46■□□□□ 0.87
Rpusd1Q8VCZ8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.46■□□□□ 0.87
Rpusd1Q8VCZ8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Rpusd1Q8VCZ8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.46■□□□□ 0.87
Rpusd1Q8VCZ8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rpusd1Q8VCZ8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpusd1Q8VCZ8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpusd1Q8VCZ8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rpusd1Q8VCZ8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Rpusd1Q8VCZ8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpusd1Q8VCZ8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rpusd1Q8VCZ8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpusd1Q8VCZ8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rpusd1Q8VCZ8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.45■□□□□ 0.86
Rpusd1Q8VCZ8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rpusd1Q8VCZ8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpusd1Q8VCZ8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpusd1Q8VCZ8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rpusd1Q8VCZ8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.45■□□□□ 0.86
Rpusd1Q8VCZ8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Rpusd1Q8VCZ8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.45■□□□□ 0.86
Rpusd1Q8VCZ8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.44■□□□□ 0.86
Rpusd1Q8VCZ8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpusd1Q8VCZ8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.44■□□□□ 0.86
Rpusd1Q8VCZ8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
Rpusd1Q8VCZ8 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.44■□□□□ 0.86
Rpusd1Q8VCZ8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rpusd1Q8VCZ8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Rpusd1Q8VCZ8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Rpusd1Q8VCZ8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpusd1Q8VCZ8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.44■□□□□ 0.86
Rpusd1Q8VCZ8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Rpusd1Q8VCZ8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpusd1Q8VCZ8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpusd1Q8VCZ8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpusd1Q8VCZ8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpusd1Q8VCZ8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpusd1Q8VCZ8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Rpusd1Q8VCZ8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.42■□□□□ 0.86
Rpusd1Q8VCZ8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpusd1Q8VCZ8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpusd1Q8VCZ8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpusd1Q8VCZ8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.42■□□□□ 0.86
Rpusd1Q8VCZ8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpusd1Q8VCZ8 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Rpusd1Q8VCZ8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpusd1Q8VCZ8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rpusd1Q8VCZ8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms