Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
Ccdc58Q8R3Q6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc58Q8R3Q6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc58Q8R3Q6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ccdc58Q8R3Q6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc58Q8R3Q6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc58Q8R3Q6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc58Q8R3Q6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc58Q8R3Q6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc58Q8R3Q6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc58Q8R3Q6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.96■□□□□ 0.63
Ccdc58Q8R3Q6 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc58Q8R3Q6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc58Q8R3Q6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc58Q8R3Q6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc58Q8R3Q6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc58Q8R3Q6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc58Q8R3Q6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc58Q8R3Q6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.94■□□□□ 0.62
Ccdc58Q8R3Q6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Ccdc58Q8R3Q6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc58Q8R3Q6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Ccdc58Q8R3Q6 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc58Q8R3Q6 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc58Q8R3Q6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc58Q8R3Q6 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.94■□□□□ 0.62
Ccdc58Q8R3Q6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc58Q8R3Q6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc58Q8R3Q6 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.93■□□□□ 0.62
Ccdc58Q8R3Q6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc58Q8R3Q6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc58Q8R3Q6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc58Q8R3Q6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc58Q8R3Q6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc58Q8R3Q6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc58Q8R3Q6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Ccdc58Q8R3Q6 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc58Q8R3Q6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc58Q8R3Q6 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.92■□□□□ 0.62
Ccdc58Q8R3Q6 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.92■□□□□ 0.62
Ccdc58Q8R3Q6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc58Q8R3Q6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC18.92■□□□□ 0.62
Ccdc58Q8R3Q6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc58Q8R3Q6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ccdc58Q8R3Q6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc58Q8R3Q6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Ccdc58Q8R3Q6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc58Q8R3Q6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc58Q8R3Q6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc58Q8R3Q6 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc58Q8R3Q6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc58Q8R3Q6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc58Q8R3Q6 Gm45364-201ENSMUST00000210883 159 ntBASIC18.91■□□□□ 0.62
Ccdc58Q8R3Q6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc58Q8R3Q6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc58Q8R3Q6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc58Q8R3Q6 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc58Q8R3Q6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc58Q8R3Q6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc58Q8R3Q6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc58Q8R3Q6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc58Q8R3Q6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc58Q8R3Q6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
Ccdc58Q8R3Q6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Ccdc58Q8R3Q6 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.89■□□□□ 0.61
Ccdc58Q8R3Q6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.89■□□□□ 0.61
Ccdc58Q8R3Q6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc58Q8R3Q6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc58Q8R3Q6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.89■□□□□ 0.61
Ccdc58Q8R3Q6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc58Q8R3Q6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc58Q8R3Q6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc58Q8R3Q6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc58Q8R3Q6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc58Q8R3Q6 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc58Q8R3Q6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc58Q8R3Q6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc58Q8R3Q6 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc58Q8R3Q6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc58Q8R3Q6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc58Q8R3Q6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc58Q8R3Q6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Ccdc58Q8R3Q6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc58Q8R3Q6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc58Q8R3Q6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.88■□□□□ 0.61
Ccdc58Q8R3Q6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc58Q8R3Q6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc58Q8R3Q6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.87■□□□□ 0.61
Ccdc58Q8R3Q6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.87■□□□□ 0.61
Ccdc58Q8R3Q6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc58Q8R3Q6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc58Q8R3Q6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc58Q8R3Q6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc58Q8R3Q6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc58Q8R3Q6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc58Q8R3Q6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc58Q8R3Q6 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc58Q8R3Q6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Ccdc58Q8R3Q6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ccdc58Q8R3Q6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms