Protein–RNA interactions for Protein: Q8R0W6

Ndfip1, NEDD4 family-interacting protein 1, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndfip1Q8R0W6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndfip1Q8R0W6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndfip1Q8R0W6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ndfip1Q8R0W6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ndfip1Q8R0W6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndfip1Q8R0W6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndfip1Q8R0W6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndfip1Q8R0W6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
Ndfip1Q8R0W6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndfip1Q8R0W6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndfip1Q8R0W6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndfip1Q8R0W6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ndfip1Q8R0W6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ndfip1Q8R0W6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ndfip1Q8R0W6 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ndfip1Q8R0W6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ndfip1Q8R0W6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ndfip1Q8R0W6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
Ndfip1Q8R0W6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Ndfip1Q8R0W6 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ndfip1Q8R0W6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndfip1Q8R0W6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.57■□□□□ 0.24
Ndfip1Q8R0W6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndfip1Q8R0W6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Ndfip1Q8R0W6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndfip1Q8R0W6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Ndfip1Q8R0W6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndfip1Q8R0W6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC16.57■□□□□ 0.24
Ndfip1Q8R0W6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Ndfip1Q8R0W6 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndfip1Q8R0W6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndfip1Q8R0W6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndfip1Q8R0W6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Ndfip1Q8R0W6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Ndfip1Q8R0W6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.56■□□□□ 0.24
Ndfip1Q8R0W6 Gm44428-201ENSMUST00000204474 874 ntBASIC16.56■□□□□ 0.24
Ndfip1Q8R0W6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ndfip1Q8R0W6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ndfip1Q8R0W6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.56■□□□□ 0.24
Ndfip1Q8R0W6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Ndfip1Q8R0W6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.55■□□□□ 0.24
Ndfip1Q8R0W6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ndfip1Q8R0W6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Ndfip1Q8R0W6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Ndfip1Q8R0W6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ndfip1Q8R0W6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ndfip1Q8R0W6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ndfip1Q8R0W6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC16.55■□□□□ 0.24
Ndfip1Q8R0W6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Ndfip1Q8R0W6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ndfip1Q8R0W6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Ndfip1Q8R0W6 Notumos-201ENSMUST00000151998 2659 ntBASIC16.54■□□□□ 0.24
Ndfip1Q8R0W6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.54■□□□□ 0.24
Ndfip1Q8R0W6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ndfip1Q8R0W6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ndfip1Q8R0W6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.54■□□□□ 0.24
Ndfip1Q8R0W6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ndfip1Q8R0W6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ndfip1Q8R0W6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ndfip1Q8R0W6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC16.54■□□□□ 0.24
Ndfip1Q8R0W6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ndfip1Q8R0W6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ndfip1Q8R0W6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Ndfip1Q8R0W6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ndfip1Q8R0W6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Ndfip1Q8R0W6 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ndfip1Q8R0W6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ndfip1Q8R0W6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ndfip1Q8R0W6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ndfip1Q8R0W6 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ndfip1Q8R0W6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ndfip1Q8R0W6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ndfip1Q8R0W6 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.53■□□□□ 0.24
Ndfip1Q8R0W6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.53■□□□□ 0.24
Ndfip1Q8R0W6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.53■□□□□ 0.24
Ndfip1Q8R0W6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Ndfip1Q8R0W6 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ndfip1Q8R0W6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Ndfip1Q8R0W6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Ndfip1Q8R0W6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ndfip1Q8R0W6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
Ndfip1Q8R0W6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ndfip1Q8R0W6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ndfip1Q8R0W6 Gm6311-201ENSMUST00000073790 878 ntBASIC16.52■□□□□ 0.24
Ndfip1Q8R0W6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
Ndfip1Q8R0W6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ndfip1Q8R0W6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndfip1Q8R0W6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ndfip1Q8R0W6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndfip1Q8R0W6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndfip1Q8R0W6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndfip1Q8R0W6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndfip1Q8R0W6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC16.51■□□□□ 0.23
Ndfip1Q8R0W6 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.51■□□□□ 0.23
Ndfip1Q8R0W6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndfip1Q8R0W6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ndfip1Q8R0W6 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.51■□□□□ 0.23
Ndfip1Q8R0W6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndfip1Q8R0W6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ndfip1Q8R0W6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms