Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Treml1Q8K558 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Treml1Q8K558 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Treml1Q8K558 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Treml1Q8K558 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.03■□□□□ 0.96
Treml1Q8K558 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Treml1Q8K558 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.02■□□□□ 0.96
Treml1Q8K558 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Treml1Q8K558 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.02■□□□□ 0.96
Treml1Q8K558 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Treml1Q8K558 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.01■□□□□ 0.95
Treml1Q8K558 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.01■□□□□ 0.95
Treml1Q8K558 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Treml1Q8K558 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21■□□□□ 0.95
Treml1Q8K558 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21■□□□□ 0.95
Treml1Q8K558 Gm43566-201ENSMUST00000196851 808 ntBASIC21■□□□□ 0.95
Treml1Q8K558 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21■□□□□ 0.95
Treml1Q8K558 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21■□□□□ 0.95
Treml1Q8K558 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Treml1Q8K558 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Treml1Q8K558 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Treml1Q8K558 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Treml1Q8K558 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.99■□□□□ 0.95
Treml1Q8K558 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Treml1Q8K558 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Treml1Q8K558 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Treml1Q8K558 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Treml1Q8K558 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Treml1Q8K558 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Treml1Q8K558 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Treml1Q8K558 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Treml1Q8K558 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Treml1Q8K558 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Treml1Q8K558 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Treml1Q8K558 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Treml1Q8K558 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Treml1Q8K558 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.97■□□□□ 0.95
Treml1Q8K558 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Treml1Q8K558 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Treml1Q8K558 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Treml1Q8K558 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Treml1Q8K558 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Treml1Q8K558 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Treml1Q8K558 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Treml1Q8K558 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.95■□□□□ 0.94
Treml1Q8K558 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Treml1Q8K558 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Treml1Q8K558 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.95■□□□□ 0.94
Treml1Q8K558 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.95■□□□□ 0.94
Treml1Q8K558 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Treml1Q8K558 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Treml1Q8K558 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Treml1Q8K558 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Treml1Q8K558 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Treml1Q8K558 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Treml1Q8K558 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.93■□□□□ 0.94
Treml1Q8K558 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Treml1Q8K558 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Treml1Q8K558 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Treml1Q8K558 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.92■□□□□ 0.94
Treml1Q8K558 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Treml1Q8K558 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Treml1Q8K558 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.92■□□□□ 0.94
Treml1Q8K558 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.92■□□□□ 0.94
Treml1Q8K558 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Treml1Q8K558 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Treml1Q8K558 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Treml1Q8K558 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Treml1Q8K558 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.92■□□□□ 0.94
Treml1Q8K558 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Treml1Q8K558 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Treml1Q8K558 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Treml1Q8K558 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Treml1Q8K558 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Treml1Q8K558 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Treml1Q8K558 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Treml1Q8K558 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Treml1Q8K558 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Treml1Q8K558 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.9■□□□□ 0.94
Treml1Q8K558 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Treml1Q8K558 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Treml1Q8K558 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Treml1Q8K558 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Treml1Q8K558 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Treml1Q8K558 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.9■□□□□ 0.94
Treml1Q8K558 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Treml1Q8K558 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Treml1Q8K558 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Treml1Q8K558 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Treml1Q8K558 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Treml1Q8K558 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Treml1Q8K558 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.89■□□□□ 0.93
Treml1Q8K558 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Treml1Q8K558 Gm5812-201ENSMUST00000061073 957 ntBASIC20.89■□□□□ 0.93
Treml1Q8K558 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Treml1Q8K558 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.89■□□□□ 0.93
Treml1Q8K558 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.89■□□□□ 0.93
Treml1Q8K558 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Treml1Q8K558 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Treml1Q8K558 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms