Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
Sf3a1Q8K4Z5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Sf3a1Q8K4Z5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Sf3a1Q8K4Z5 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Sf3a1Q8K4Z5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Sf3a1Q8K4Z5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC26.1■■□□□ 1.77
Sf3a1Q8K4Z5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Sf3a1Q8K4Z5 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Sf3a1Q8K4Z5 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Sf3a1Q8K4Z5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Sf3a1Q8K4Z5 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC26.09■■□□□ 1.77
Sf3a1Q8K4Z5 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Sf3a1Q8K4Z5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
Sf3a1Q8K4Z5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC26.09■■□□□ 1.77
Sf3a1Q8K4Z5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Sf3a1Q8K4Z5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
Sf3a1Q8K4Z5 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Sf3a1Q8K4Z5 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Sf3a1Q8K4Z5 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
Sf3a1Q8K4Z5 Gm28536-201ENSMUST00000190971 1317 ntBASIC26.07■■□□□ 1.76
Sf3a1Q8K4Z5 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sf3a1Q8K4Z5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sf3a1Q8K4Z5 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Sf3a1Q8K4Z5 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC26.06■■□□□ 1.76
Sf3a1Q8K4Z5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sf3a1Q8K4Z5 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sf3a1Q8K4Z5 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Sf3a1Q8K4Z5 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Sf3a1Q8K4Z5 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sf3a1Q8K4Z5 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Sf3a1Q8K4Z5 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Sf3a1Q8K4Z5 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Sf3a1Q8K4Z5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC26.05■■□□□ 1.76
Sf3a1Q8K4Z5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC26.05■■□□□ 1.76
Sf3a1Q8K4Z5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC26.04■■□□□ 1.76
Sf3a1Q8K4Z5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sf3a1Q8K4Z5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sf3a1Q8K4Z5 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Sf3a1Q8K4Z5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sf3a1Q8K4Z5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sf3a1Q8K4Z5 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC26.04■■□□□ 1.76
Sf3a1Q8K4Z5 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sf3a1Q8K4Z5 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC26.03■■□□□ 1.76
Sf3a1Q8K4Z5 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Sf3a1Q8K4Z5 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Sf3a1Q8K4Z5 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC26.03■■□□□ 1.76
Sf3a1Q8K4Z5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Sf3a1Q8K4Z5 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Sf3a1Q8K4Z5 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Sf3a1Q8K4Z5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Sf3a1Q8K4Z5 Gm5812-201ENSMUST00000061073 957 ntBASIC26.02■■□□□ 1.76
Sf3a1Q8K4Z5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Sf3a1Q8K4Z5 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Sf3a1Q8K4Z5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Sf3a1Q8K4Z5 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
Sf3a1Q8K4Z5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Sf3a1Q8K4Z5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Sf3a1Q8K4Z5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Sf3a1Q8K4Z5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Sf3a1Q8K4Z5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC26■■□□□ 1.75
Sf3a1Q8K4Z5 AC153962.1-201ENSMUST00000218530 1948 ntBASIC26■■□□□ 1.75
Sf3a1Q8K4Z5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Sf3a1Q8K4Z5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC26■■□□□ 1.75
Sf3a1Q8K4Z5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
Sf3a1Q8K4Z5 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Sf3a1Q8K4Z5 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC26■■□□□ 1.75
Sf3a1Q8K4Z5 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Sf3a1Q8K4Z5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Sf3a1Q8K4Z5 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Sf3a1Q8K4Z5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC25.99■■□□□ 1.75
Sf3a1Q8K4Z5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC25.99■■□□□ 1.75
Sf3a1Q8K4Z5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Sf3a1Q8K4Z5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC25.99■■□□□ 1.75
Sf3a1Q8K4Z5 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Sf3a1Q8K4Z5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Sf3a1Q8K4Z5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
Sf3a1Q8K4Z5 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Sf3a1Q8K4Z5 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC25.98■■□□□ 1.75
Sf3a1Q8K4Z5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
Sf3a1Q8K4Z5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Sf3a1Q8K4Z5 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Sf3a1Q8K4Z5 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
Sf3a1Q8K4Z5 Gm16464-201ENSMUST00000117815 1095 ntBASIC25.97■■□□□ 1.75
Sf3a1Q8K4Z5 Gm11847-201ENSMUST00000125165 1119 ntBASIC25.97■■□□□ 1.75
Sf3a1Q8K4Z5 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC25.97■■□□□ 1.75
Sf3a1Q8K4Z5 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Sf3a1Q8K4Z5 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Sf3a1Q8K4Z5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC25.97■■□□□ 1.75
Sf3a1Q8K4Z5 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Sf3a1Q8K4Z5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Sf3a1Q8K4Z5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
Sf3a1Q8K4Z5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
Sf3a1Q8K4Z5 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Sf3a1Q8K4Z5 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Sf3a1Q8K4Z5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC25.96■■□□□ 1.75
Sf3a1Q8K4Z5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
Sf3a1Q8K4Z5 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.75
Sf3a1Q8K4Z5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Sf3a1Q8K4Z5 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Sf3a1Q8K4Z5 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms