Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfwd3Q8CIK8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfwd3Q8CIK8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rfwd3Q8CIK8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Rfwd3Q8CIK8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rfwd3Q8CIK8 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.98■□□□□ 0.79
Rfwd3Q8CIK8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rfwd3Q8CIK8 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfwd3Q8CIK8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rfwd3Q8CIK8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Rfwd3Q8CIK8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfwd3Q8CIK8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfwd3Q8CIK8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rfwd3Q8CIK8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfwd3Q8CIK8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfwd3Q8CIK8 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfwd3Q8CIK8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Rfwd3Q8CIK8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rfwd3Q8CIK8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Rfwd3Q8CIK8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Rfwd3Q8CIK8 Gm43566-201ENSMUST00000196851 808 ntBASIC19.95■□□□□ 0.78
Rfwd3Q8CIK8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfwd3Q8CIK8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Rfwd3Q8CIK8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Rfwd3Q8CIK8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Rfwd3Q8CIK8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfwd3Q8CIK8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rfwd3Q8CIK8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfwd3Q8CIK8 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfwd3Q8CIK8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Rfwd3Q8CIK8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfwd3Q8CIK8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Rfwd3Q8CIK8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfwd3Q8CIK8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfwd3Q8CIK8 Gm13238-201ENSMUST00000117655 780 ntBASIC19.93■□□□□ 0.78
Rfwd3Q8CIK8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfwd3Q8CIK8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rfwd3Q8CIK8 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rfwd3Q8CIK8 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfwd3Q8CIK8 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Rfwd3Q8CIK8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.92■□□□□ 0.78
Rfwd3Q8CIK8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfwd3Q8CIK8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfwd3Q8CIK8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfwd3Q8CIK8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Rfwd3Q8CIK8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.91■□□□□ 0.78
Rfwd3Q8CIK8 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rfwd3Q8CIK8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rfwd3Q8CIK8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rfwd3Q8CIK8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.91■□□□□ 0.78
Rfwd3Q8CIK8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfwd3Q8CIK8 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Rfwd3Q8CIK8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfwd3Q8CIK8 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfwd3Q8CIK8 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rfwd3Q8CIK8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfwd3Q8CIK8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.9■□□□□ 0.78
Rfwd3Q8CIK8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfwd3Q8CIK8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rfwd3Q8CIK8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfwd3Q8CIK8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rfwd3Q8CIK8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfwd3Q8CIK8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfwd3Q8CIK8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfwd3Q8CIK8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rfwd3Q8CIK8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rfwd3Q8CIK8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfwd3Q8CIK8 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfwd3Q8CIK8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfwd3Q8CIK8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfwd3Q8CIK8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfwd3Q8CIK8 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfwd3Q8CIK8 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rfwd3Q8CIK8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rfwd3Q8CIK8 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rfwd3Q8CIK8 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.88■□□□□ 0.77
Rfwd3Q8CIK8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Rfwd3Q8CIK8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Rfwd3Q8CIK8 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfwd3Q8CIK8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfwd3Q8CIK8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rfwd3Q8CIK8 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfwd3Q8CIK8 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfwd3Q8CIK8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rfwd3Q8CIK8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfwd3Q8CIK8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rfwd3Q8CIK8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.87■□□□□ 0.77
Rfwd3Q8CIK8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfwd3Q8CIK8 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Rfwd3Q8CIK8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfwd3Q8CIK8 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfwd3Q8CIK8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rfwd3Q8CIK8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Rfwd3Q8CIK8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfwd3Q8CIK8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.86■□□□□ 0.77
Rfwd3Q8CIK8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Rfwd3Q8CIK8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Rfwd3Q8CIK8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfwd3Q8CIK8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfwd3Q8CIK8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms