Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rdh1Q8CGV4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Rdh1Q8CGV4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.82■□□□□ 0.92
Rdh1Q8CGV4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.82■□□□□ 0.92
Rdh1Q8CGV4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rdh1Q8CGV4 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rdh1Q8CGV4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rdh1Q8CGV4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rdh1Q8CGV4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Rdh1Q8CGV4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.81■□□□□ 0.92
Rdh1Q8CGV4 Gm10399-202ENSMUST00000202768 748 ntBASIC20.81■□□□□ 0.92
Rdh1Q8CGV4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Rdh1Q8CGV4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rdh1Q8CGV4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Rdh1Q8CGV4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Rdh1Q8CGV4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rdh1Q8CGV4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rdh1Q8CGV4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Rdh1Q8CGV4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rdh1Q8CGV4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rdh1Q8CGV4 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rdh1Q8CGV4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rdh1Q8CGV4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rdh1Q8CGV4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rdh1Q8CGV4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rdh1Q8CGV4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Rdh1Q8CGV4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rdh1Q8CGV4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.79■□□□□ 0.92
Rdh1Q8CGV4 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rdh1Q8CGV4 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Rdh1Q8CGV4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Rdh1Q8CGV4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Rdh1Q8CGV4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rdh1Q8CGV4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rdh1Q8CGV4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.78■□□□□ 0.92
Rdh1Q8CGV4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rdh1Q8CGV4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.78■□□□□ 0.92
Rdh1Q8CGV4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.78■□□□□ 0.92
Rdh1Q8CGV4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rdh1Q8CGV4 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Rdh1Q8CGV4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rdh1Q8CGV4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.77■□□□□ 0.92
Rdh1Q8CGV4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.77■□□□□ 0.91
Rdh1Q8CGV4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rdh1Q8CGV4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rdh1Q8CGV4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rdh1Q8CGV4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Rdh1Q8CGV4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.76■□□□□ 0.91
Rdh1Q8CGV4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rdh1Q8CGV4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rdh1Q8CGV4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rdh1Q8CGV4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rdh1Q8CGV4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rdh1Q8CGV4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.75■□□□□ 0.91
Rdh1Q8CGV4 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rdh1Q8CGV4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rdh1Q8CGV4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.75■□□□□ 0.91
Rdh1Q8CGV4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rdh1Q8CGV4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rdh1Q8CGV4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.74■□□□□ 0.91
Rdh1Q8CGV4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Rdh1Q8CGV4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rdh1Q8CGV4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.74■□□□□ 0.91
Rdh1Q8CGV4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rdh1Q8CGV4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rdh1Q8CGV4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Rdh1Q8CGV4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rdh1Q8CGV4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rdh1Q8CGV4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.73■□□□□ 0.91
Rdh1Q8CGV4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.73■□□□□ 0.91
Rdh1Q8CGV4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rdh1Q8CGV4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.73■□□□□ 0.91
Rdh1Q8CGV4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rdh1Q8CGV4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rdh1Q8CGV4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rdh1Q8CGV4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rdh1Q8CGV4 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rdh1Q8CGV4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rdh1Q8CGV4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rdh1Q8CGV4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rdh1Q8CGV4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rdh1Q8CGV4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rdh1Q8CGV4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rdh1Q8CGV4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rdh1Q8CGV4 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.71■□□□□ 0.91
Rdh1Q8CGV4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rdh1Q8CGV4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rdh1Q8CGV4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Rdh1Q8CGV4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rdh1Q8CGV4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rdh1Q8CGV4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rdh1Q8CGV4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rdh1Q8CGV4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rdh1Q8CGV4 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rdh1Q8CGV4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.7■□□□□ 0.9
Rdh1Q8CGV4 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rdh1Q8CGV4 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.69■□□□□ 0.9
Rdh1Q8CGV4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rdh1Q8CGV4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.68■□□□□ 0.9
Rdh1Q8CGV4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms