Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hist3h2bbQ8CGP0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.27■□□□□ 0.2
Hist3h2bbQ8CGP0 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hist3h2bbQ8CGP0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC16.27■□□□□ 0.2
Hist3h2bbQ8CGP0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Hist3h2bbQ8CGP0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Hist3h2bbQ8CGP0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Hist3h2bbQ8CGP0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist3h2bbQ8CGP0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.26■□□□□ 0.19
Hist3h2bbQ8CGP0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist3h2bbQ8CGP0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hist3h2bbQ8CGP0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Hist3h2bbQ8CGP0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Hist3h2bbQ8CGP0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist3h2bbQ8CGP0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.26■□□□□ 0.19
Hist3h2bbQ8CGP0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist3h2bbQ8CGP0 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist3h2bbQ8CGP0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist3h2bbQ8CGP0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hist3h2bbQ8CGP0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hist3h2bbQ8CGP0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist3h2bbQ8CGP0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Hist3h2bbQ8CGP0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist3h2bbQ8CGP0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist3h2bbQ8CGP0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist3h2bbQ8CGP0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Hist3h2bbQ8CGP0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hist3h2bbQ8CGP0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist3h2bbQ8CGP0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hist3h2bbQ8CGP0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist3h2bbQ8CGP0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist3h2bbQ8CGP0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hist3h2bbQ8CGP0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hist3h2bbQ8CGP0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Hist3h2bbQ8CGP0 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.24■□□□□ 0.19
Hist3h2bbQ8CGP0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist3h2bbQ8CGP0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist3h2bbQ8CGP0 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hist3h2bbQ8CGP0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Hist3h2bbQ8CGP0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hist3h2bbQ8CGP0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hist3h2bbQ8CGP0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hist3h2bbQ8CGP0 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hist3h2bbQ8CGP0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hist3h2bbQ8CGP0 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hist3h2bbQ8CGP0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hist3h2bbQ8CGP0 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.23■□□□□ 0.19
Hist3h2bbQ8CGP0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hist3h2bbQ8CGP0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hist3h2bbQ8CGP0 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.23■□□□□ 0.19
Hist3h2bbQ8CGP0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hist3h2bbQ8CGP0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.23■□□□□ 0.19
Hist3h2bbQ8CGP0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hist3h2bbQ8CGP0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hist3h2bbQ8CGP0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hist3h2bbQ8CGP0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hist3h2bbQ8CGP0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hist3h2bbQ8CGP0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hist3h2bbQ8CGP0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hist3h2bbQ8CGP0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Hist3h2bbQ8CGP0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hist3h2bbQ8CGP0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hist3h2bbQ8CGP0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hist3h2bbQ8CGP0 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.22■□□□□ 0.19
Hist3h2bbQ8CGP0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hist3h2bbQ8CGP0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hist3h2bbQ8CGP0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hist3h2bbQ8CGP0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Hist3h2bbQ8CGP0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hist3h2bbQ8CGP0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hist3h2bbQ8CGP0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hist3h2bbQ8CGP0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hist3h2bbQ8CGP0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hist3h2bbQ8CGP0 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.21■□□□□ 0.19
Hist3h2bbQ8CGP0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hist3h2bbQ8CGP0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.2■□□□□ 0.18
Hist3h2bbQ8CGP0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hist3h2bbQ8CGP0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hist3h2bbQ8CGP0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hist3h2bbQ8CGP0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hist3h2bbQ8CGP0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Hist3h2bbQ8CGP0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hist3h2bbQ8CGP0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hist3h2bbQ8CGP0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hist3h2bbQ8CGP0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hist3h2bbQ8CGP0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Hist3h2bbQ8CGP0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.19■□□□□ 0.18
Hist3h2bbQ8CGP0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hist3h2bbQ8CGP0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.19■□□□□ 0.18
Hist3h2bbQ8CGP0 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.19■□□□□ 0.18
Hist3h2bbQ8CGP0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hist3h2bbQ8CGP0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hist3h2bbQ8CGP0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
Hist3h2bbQ8CGP0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Hist3h2bbQ8CGP0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Hist3h2bbQ8CGP0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hist3h2bbQ8CGP0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.18■□□□□ 0.18
Hist3h2bbQ8CGP0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Hist3h2bbQ8CGP0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Hist3h2bbQ8CGP0 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms