Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco1Q8CEZ1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.41■□□□□ 0.7
Smco1Q8CEZ1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smco1Q8CEZ1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Smco1Q8CEZ1 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.41■□□□□ 0.7
Smco1Q8CEZ1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco1Q8CEZ1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco1Q8CEZ1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.41■□□□□ 0.7
Smco1Q8CEZ1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Smco1Q8CEZ1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco1Q8CEZ1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smco1Q8CEZ1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smco1Q8CEZ1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smco1Q8CEZ1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smco1Q8CEZ1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Smco1Q8CEZ1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.4■□□□□ 0.7
Smco1Q8CEZ1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.4■□□□□ 0.7
Smco1Q8CEZ1 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.4■□□□□ 0.7
Smco1Q8CEZ1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smco1Q8CEZ1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smco1Q8CEZ1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Smco1Q8CEZ1 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.39■□□□□ 0.7
Smco1Q8CEZ1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smco1Q8CEZ1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smco1Q8CEZ1 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smco1Q8CEZ1 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.39■□□□□ 0.69
Smco1Q8CEZ1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smco1Q8CEZ1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smco1Q8CEZ1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smco1Q8CEZ1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smco1Q8CEZ1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smco1Q8CEZ1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Smco1Q8CEZ1 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.38■□□□□ 0.69
Smco1Q8CEZ1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smco1Q8CEZ1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smco1Q8CEZ1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smco1Q8CEZ1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smco1Q8CEZ1 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smco1Q8CEZ1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smco1Q8CEZ1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smco1Q8CEZ1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smco1Q8CEZ1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smco1Q8CEZ1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smco1Q8CEZ1 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smco1Q8CEZ1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smco1Q8CEZ1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smco1Q8CEZ1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smco1Q8CEZ1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smco1Q8CEZ1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smco1Q8CEZ1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Smco1Q8CEZ1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smco1Q8CEZ1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smco1Q8CEZ1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smco1Q8CEZ1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Smco1Q8CEZ1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.35■□□□□ 0.69
Smco1Q8CEZ1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Smco1Q8CEZ1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Smco1Q8CEZ1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smco1Q8CEZ1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smco1Q8CEZ1 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smco1Q8CEZ1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smco1Q8CEZ1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.34■□□□□ 0.69
Smco1Q8CEZ1 Gm45855-201ENSMUST00000212546 880 ntBASIC19.34■□□□□ 0.69
Smco1Q8CEZ1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smco1Q8CEZ1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Smco1Q8CEZ1 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smco1Q8CEZ1 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smco1Q8CEZ1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Smco1Q8CEZ1 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.33■□□□□ 0.68
Smco1Q8CEZ1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smco1Q8CEZ1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smco1Q8CEZ1 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smco1Q8CEZ1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Smco1Q8CEZ1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Smco1Q8CEZ1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smco1Q8CEZ1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.31■□□□□ 0.68
Smco1Q8CEZ1 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smco1Q8CEZ1 Nkain2-201ENSMUST00000092602 558 ntBASIC19.31■□□□□ 0.68
Smco1Q8CEZ1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smco1Q8CEZ1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smco1Q8CEZ1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smco1Q8CEZ1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smco1Q8CEZ1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smco1Q8CEZ1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smco1Q8CEZ1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.29■□□□□ 0.68
Smco1Q8CEZ1 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smco1Q8CEZ1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smco1Q8CEZ1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smco1Q8CEZ1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Smco1Q8CEZ1 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smco1Q8CEZ1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smco1Q8CEZ1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smco1Q8CEZ1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smco1Q8CEZ1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smco1Q8CEZ1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smco1Q8CEZ1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smco1Q8CEZ1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smco1Q8CEZ1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Smco1Q8CEZ1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smco1Q8CEZ1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms