Protein–RNA interactions for Protein: Q8CEE7

Rdh13, Retinol dehydrogenase 13, mousemouse

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh13Q8CEE7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.69■□□□□ 0.9
Rdh13Q8CEE7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rdh13Q8CEE7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rdh13Q8CEE7 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rdh13Q8CEE7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rdh13Q8CEE7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rdh13Q8CEE7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.67■□□□□ 0.9
Rdh13Q8CEE7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rdh13Q8CEE7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rdh13Q8CEE7 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Rdh13Q8CEE7 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rdh13Q8CEE7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rdh13Q8CEE7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rdh13Q8CEE7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rdh13Q8CEE7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rdh13Q8CEE7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rdh13Q8CEE7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rdh13Q8CEE7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rdh13Q8CEE7 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rdh13Q8CEE7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rdh13Q8CEE7 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rdh13Q8CEE7 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rdh13Q8CEE7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rdh13Q8CEE7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rdh13Q8CEE7 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rdh13Q8CEE7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rdh13Q8CEE7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.65■□□□□ 0.9
Rdh13Q8CEE7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rdh13Q8CEE7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rdh13Q8CEE7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rdh13Q8CEE7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rdh13Q8CEE7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rdh13Q8CEE7 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rdh13Q8CEE7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rdh13Q8CEE7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Rdh13Q8CEE7 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.64■□□□□ 0.9
Rdh13Q8CEE7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rdh13Q8CEE7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rdh13Q8CEE7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Rdh13Q8CEE7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rdh13Q8CEE7 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rdh13Q8CEE7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.64■□□□□ 0.89
Rdh13Q8CEE7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rdh13Q8CEE7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
Rdh13Q8CEE7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rdh13Q8CEE7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.63■□□□□ 0.89
Rdh13Q8CEE7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rdh13Q8CEE7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Rdh13Q8CEE7 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rdh13Q8CEE7 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rdh13Q8CEE7 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Rdh13Q8CEE7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rdh13Q8CEE7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rdh13Q8CEE7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rdh13Q8CEE7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rdh13Q8CEE7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rdh13Q8CEE7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rdh13Q8CEE7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rdh13Q8CEE7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rdh13Q8CEE7 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rdh13Q8CEE7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rdh13Q8CEE7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rdh13Q8CEE7 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rdh13Q8CEE7 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rdh13Q8CEE7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.6■□□□□ 0.89
Rdh13Q8CEE7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rdh13Q8CEE7 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Rdh13Q8CEE7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rdh13Q8CEE7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh13Q8CEE7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh13Q8CEE7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.59■□□□□ 0.89
Rdh13Q8CEE7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh13Q8CEE7 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh13Q8CEE7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh13Q8CEE7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh13Q8CEE7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rdh13Q8CEE7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rdh13Q8CEE7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.59■□□□□ 0.89
Rdh13Q8CEE7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rdh13Q8CEE7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rdh13Q8CEE7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rdh13Q8CEE7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rdh13Q8CEE7 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rdh13Q8CEE7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rdh13Q8CEE7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rdh13Q8CEE7 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh13Q8CEE7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh13Q8CEE7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh13Q8CEE7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh13Q8CEE7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh13Q8CEE7 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh13Q8CEE7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh13Q8CEE7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh13Q8CEE7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh13Q8CEE7 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rdh13Q8CEE7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh13Q8CEE7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh13Q8CEE7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rdh13Q8CEE7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rdh13Q8CEE7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms