Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Tsen54Q8C2A2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tsen54Q8C2A2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tsen54Q8C2A2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tsen54Q8C2A2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tsen54Q8C2A2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Tsen54Q8C2A2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tsen54Q8C2A2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Tsen54Q8C2A2 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tsen54Q8C2A2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tsen54Q8C2A2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Tsen54Q8C2A2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Tsen54Q8C2A2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tsen54Q8C2A2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tsen54Q8C2A2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tsen54Q8C2A2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tsen54Q8C2A2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Tsen54Q8C2A2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.65■□□□□ 0.42
Tsen54Q8C2A2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Tsen54Q8C2A2 Iqck-206ENSMUST00000208658 2891 ntBASIC17.64■□□□□ 0.41
Tsen54Q8C2A2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tsen54Q8C2A2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tsen54Q8C2A2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tsen54Q8C2A2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tsen54Q8C2A2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Tsen54Q8C2A2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Tsen54Q8C2A2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tsen54Q8C2A2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tsen54Q8C2A2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tsen54Q8C2A2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Tsen54Q8C2A2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tsen54Q8C2A2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tsen54Q8C2A2 Gm6311-201ENSMUST00000073790 878 ntBASIC17.63■□□□□ 0.41
Tsen54Q8C2A2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tsen54Q8C2A2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tsen54Q8C2A2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tsen54Q8C2A2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
Tsen54Q8C2A2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tsen54Q8C2A2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tsen54Q8C2A2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tsen54Q8C2A2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tsen54Q8C2A2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tsen54Q8C2A2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tsen54Q8C2A2 Mir3960-201ENSMUST00000198213 73 ntBASIC17.62■□□□□ 0.41
Tsen54Q8C2A2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.62■□□□□ 0.41
Tsen54Q8C2A2 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.62■□□□□ 0.41
Tsen54Q8C2A2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tsen54Q8C2A2 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.62■□□□□ 0.41
Tsen54Q8C2A2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Tsen54Q8C2A2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tsen54Q8C2A2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tsen54Q8C2A2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tsen54Q8C2A2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tsen54Q8C2A2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tsen54Q8C2A2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tsen54Q8C2A2 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tsen54Q8C2A2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tsen54Q8C2A2 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tsen54Q8C2A2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.61■□□□□ 0.41
Tsen54Q8C2A2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tsen54Q8C2A2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tsen54Q8C2A2 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tsen54Q8C2A2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Tsen54Q8C2A2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tsen54Q8C2A2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tsen54Q8C2A2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tsen54Q8C2A2 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tsen54Q8C2A2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tsen54Q8C2A2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.59■□□□□ 0.41
Tsen54Q8C2A2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.59■□□□□ 0.41
Tsen54Q8C2A2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.59■□□□□ 0.41
Tsen54Q8C2A2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.59■□□□□ 0.41
Tsen54Q8C2A2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tsen54Q8C2A2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tsen54Q8C2A2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Tsen54Q8C2A2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Tsen54Q8C2A2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Tsen54Q8C2A2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tsen54Q8C2A2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.41
Tsen54Q8C2A2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
Tsen54Q8C2A2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tsen54Q8C2A2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.58■□□□□ 0.4
Tsen54Q8C2A2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.58■□□□□ 0.4
Tsen54Q8C2A2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tsen54Q8C2A2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tsen54Q8C2A2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tsen54Q8C2A2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tsen54Q8C2A2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tsen54Q8C2A2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Tsen54Q8C2A2 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.57■□□□□ 0.4
Tsen54Q8C2A2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tsen54Q8C2A2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Tsen54Q8C2A2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tsen54Q8C2A2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tsen54Q8C2A2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tsen54Q8C2A2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tsen54Q8C2A2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Tsen54Q8C2A2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tsen54Q8C2A2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tsen54Q8C2A2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms