Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chd9Q8BYH8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd9Q8BYH8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd9Q8BYH8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd9Q8BYH8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chd9Q8BYH8 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.19■□□□□ 0.34
Chd9Q8BYH8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd9Q8BYH8 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.19■□□□□ 0.34
Chd9Q8BYH8 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd9Q8BYH8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.19■□□□□ 0.34
Chd9Q8BYH8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd9Q8BYH8 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.18■□□□□ 0.34
Chd9Q8BYH8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd9Q8BYH8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Chd9Q8BYH8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd9Q8BYH8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd9Q8BYH8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd9Q8BYH8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chd9Q8BYH8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.17■□□□□ 0.34
Chd9Q8BYH8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chd9Q8BYH8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.17■□□□□ 0.34
Chd9Q8BYH8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
Chd9Q8BYH8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.17■□□□□ 0.34
Chd9Q8BYH8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Chd9Q8BYH8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Chd9Q8BYH8 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd9Q8BYH8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.17■□□□□ 0.34
Chd9Q8BYH8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd9Q8BYH8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.17■□□□□ 0.34
Chd9Q8BYH8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd9Q8BYH8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.17■□□□□ 0.34
Chd9Q8BYH8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Chd9Q8BYH8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Chd9Q8BYH8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.16■□□□□ 0.34
Chd9Q8BYH8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd9Q8BYH8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.16■□□□□ 0.34
Chd9Q8BYH8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Chd9Q8BYH8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Chd9Q8BYH8 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd9Q8BYH8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Chd9Q8BYH8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.15■□□□□ 0.34
Chd9Q8BYH8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Chd9Q8BYH8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Chd9Q8BYH8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.14■□□□□ 0.34
Chd9Q8BYH8 Gm43017-201ENSMUST00000198296 752 ntBASIC17.14■□□□□ 0.34
Chd9Q8BYH8 Gm42642-201ENSMUST00000200683 355 ntBASIC17.14■□□□□ 0.34
Chd9Q8BYH8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Chd9Q8BYH8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Chd9Q8BYH8 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Chd9Q8BYH8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd9Q8BYH8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Chd9Q8BYH8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Chd9Q8BYH8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd9Q8BYH8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Chd9Q8BYH8 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Chd9Q8BYH8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.14■□□□□ 0.33
Chd9Q8BYH8 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Chd9Q8BYH8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Chd9Q8BYH8 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd9Q8BYH8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.13■□□□□ 0.33
Chd9Q8BYH8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chd9Q8BYH8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Chd9Q8BYH8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chd9Q8BYH8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.11■□□□□ 0.33
Chd9Q8BYH8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd9Q8BYH8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd9Q8BYH8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Chd9Q8BYH8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd9Q8BYH8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd9Q8BYH8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chd9Q8BYH8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.11■□□□□ 0.33
Chd9Q8BYH8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Chd9Q8BYH8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd9Q8BYH8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd9Q8BYH8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Chd9Q8BYH8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd9Q8BYH8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd9Q8BYH8 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Chd9Q8BYH8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd9Q8BYH8 Gm10493-201ENSMUST00000097270 612 ntBASIC17.09■□□□□ 0.33
Chd9Q8BYH8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd9Q8BYH8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd9Q8BYH8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Chd9Q8BYH8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chd9Q8BYH8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.08■□□□□ 0.33
Chd9Q8BYH8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Chd9Q8BYH8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chd9Q8BYH8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd9Q8BYH8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Chd9Q8BYH8 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Chd9Q8BYH8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Chd9Q8BYH8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Chd9Q8BYH8 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd9Q8BYH8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.07■□□□□ 0.32
Chd9Q8BYH8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.07■□□□□ 0.32
Chd9Q8BYH8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd9Q8BYH8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.07■□□□□ 0.32
Chd9Q8BYH8 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd9Q8BYH8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Chd9Q8BYH8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms