Protein–RNA interactions for Protein: Q8BV79

Trank1, TPR and ankyrin repeat-containing protein 1, mousemouse

Predictions only

Length 2,999 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trank1Q8BV79 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Trank1Q8BV79 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trank1Q8BV79 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trank1Q8BV79 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.85■□□□□ 0.61
Trank1Q8BV79 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trank1Q8BV79 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.84■□□□□ 0.61
Trank1Q8BV79 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.84■□□□□ 0.61
Trank1Q8BV79 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trank1Q8BV79 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trank1Q8BV79 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trank1Q8BV79 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trank1Q8BV79 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trank1Q8BV79 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trank1Q8BV79 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Trank1Q8BV79 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trank1Q8BV79 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trank1Q8BV79 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trank1Q8BV79 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.82■□□□□ 0.6
Trank1Q8BV79 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.82■□□□□ 0.6
Trank1Q8BV79 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Trank1Q8BV79 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.82■□□□□ 0.6
Trank1Q8BV79 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Trank1Q8BV79 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Trank1Q8BV79 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trank1Q8BV79 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Trank1Q8BV79 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trank1Q8BV79 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trank1Q8BV79 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trank1Q8BV79 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trank1Q8BV79 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trank1Q8BV79 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trank1Q8BV79 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trank1Q8BV79 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.8■□□□□ 0.6
Trank1Q8BV79 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trank1Q8BV79 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trank1Q8BV79 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Trank1Q8BV79 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trank1Q8BV79 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trank1Q8BV79 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trank1Q8BV79 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trank1Q8BV79 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.78■□□□□ 0.6
Trank1Q8BV79 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trank1Q8BV79 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trank1Q8BV79 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Trank1Q8BV79 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trank1Q8BV79 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trank1Q8BV79 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trank1Q8BV79 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.76■□□□□ 0.59
Trank1Q8BV79 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trank1Q8BV79 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trank1Q8BV79 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trank1Q8BV79 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trank1Q8BV79 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trank1Q8BV79 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trank1Q8BV79 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trank1Q8BV79 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trank1Q8BV79 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trank1Q8BV79 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trank1Q8BV79 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.75■□□□□ 0.59
Trank1Q8BV79 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.75■□□□□ 0.59
Trank1Q8BV79 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trank1Q8BV79 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trank1Q8BV79 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trank1Q8BV79 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trank1Q8BV79 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trank1Q8BV79 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trank1Q8BV79 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Trank1Q8BV79 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Trank1Q8BV79 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trank1Q8BV79 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trank1Q8BV79 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trank1Q8BV79 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trank1Q8BV79 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trank1Q8BV79 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trank1Q8BV79 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trank1Q8BV79 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trank1Q8BV79 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.74■□□□□ 0.59
Trank1Q8BV79 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trank1Q8BV79 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trank1Q8BV79 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trank1Q8BV79 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Trank1Q8BV79 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trank1Q8BV79 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trank1Q8BV79 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trank1Q8BV79 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trank1Q8BV79 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trank1Q8BV79 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trank1Q8BV79 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Trank1Q8BV79 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trank1Q8BV79 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Trank1Q8BV79 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Trank1Q8BV79 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trank1Q8BV79 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trank1Q8BV79 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.71■□□□□ 0.59
Trank1Q8BV79 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trank1Q8BV79 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Trank1Q8BV79 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trank1Q8BV79 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trank1Q8BV79 Gm27011-201ENSMUST00000182352 972 ntBASIC18.71■□□□□ 0.59
Trank1Q8BV79 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms