Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Lsm11Q8BUV6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Lsm11Q8BUV6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Lsm11Q8BUV6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lsm11Q8BUV6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Lsm11Q8BUV6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm11Q8BUV6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm11Q8BUV6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Lsm11Q8BUV6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm11Q8BUV6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Lsm11Q8BUV6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Lsm11Q8BUV6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm11Q8BUV6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm11Q8BUV6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm11Q8BUV6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm11Q8BUV6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm11Q8BUV6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.06■□□□□ 0.48
Lsm11Q8BUV6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm11Q8BUV6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.06■□□□□ 0.48
Lsm11Q8BUV6 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.06■□□□□ 0.48
Lsm11Q8BUV6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Lsm11Q8BUV6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm11Q8BUV6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm11Q8BUV6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm11Q8BUV6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Lsm11Q8BUV6 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm11Q8BUV6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm11Q8BUV6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm11Q8BUV6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm11Q8BUV6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.05■□□□□ 0.48
Lsm11Q8BUV6 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm11Q8BUV6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm11Q8BUV6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.05■□□□□ 0.48
Lsm11Q8BUV6 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm11Q8BUV6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Lsm11Q8BUV6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm11Q8BUV6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm11Q8BUV6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.04■□□□□ 0.48
Lsm11Q8BUV6 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm11Q8BUV6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.04■□□□□ 0.48
Lsm11Q8BUV6 Gm7432-201ENSMUST00000210343 879 ntBASIC18.04■□□□□ 0.48
Lsm11Q8BUV6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm11Q8BUV6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm11Q8BUV6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm11Q8BUV6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm11Q8BUV6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Lsm11Q8BUV6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Lsm11Q8BUV6 Gm11599-201ENSMUST00000118720 878 ntBASIC18.03■□□□□ 0.48
Lsm11Q8BUV6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm11Q8BUV6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm11Q8BUV6 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.03■□□□□ 0.48
Lsm11Q8BUV6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm11Q8BUV6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm11Q8BUV6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm11Q8BUV6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm11Q8BUV6 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm11Q8BUV6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Lsm11Q8BUV6 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.02■□□□□ 0.48
Lsm11Q8BUV6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm11Q8BUV6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Lsm11Q8BUV6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Lsm11Q8BUV6 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
Lsm11Q8BUV6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm11Q8BUV6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Lsm11Q8BUV6 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.01■□□□□ 0.47
Lsm11Q8BUV6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.01■□□□□ 0.47
Lsm11Q8BUV6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm11Q8BUV6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Lsm11Q8BUV6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm11Q8BUV6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm11Q8BUV6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm11Q8BUV6 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Lsm11Q8BUV6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm11Q8BUV6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Lsm11Q8BUV6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm11Q8BUV6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.99■□□□□ 0.47
Lsm11Q8BUV6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm11Q8BUV6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm11Q8BUV6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Lsm11Q8BUV6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm11Q8BUV6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm11Q8BUV6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm11Q8BUV6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Lsm11Q8BUV6 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm11Q8BUV6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Lsm11Q8BUV6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm11Q8BUV6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm11Q8BUV6 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Lsm11Q8BUV6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Lsm11Q8BUV6 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm11Q8BUV6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm11Q8BUV6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm11Q8BUV6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.97■□□□□ 0.47
Lsm11Q8BUV6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm11Q8BUV6 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Lsm11Q8BUV6 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.96■□□□□ 0.47
Lsm11Q8BUV6 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm11Q8BUV6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Lsm11Q8BUV6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Lsm11Q8BUV6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms