Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Usp43Q8BUM9 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.67■■□□□ 1.06
Usp43Q8BUM9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp43Q8BUM9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Usp43Q8BUM9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp43Q8BUM9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.67■■□□□ 1.06
Usp43Q8BUM9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.67■■□□□ 1.06
Usp43Q8BUM9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp43Q8BUM9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Usp43Q8BUM9 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.67■■□□□ 1.06
Usp43Q8BUM9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp43Q8BUM9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Usp43Q8BUM9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp43Q8BUM9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp43Q8BUM9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp43Q8BUM9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.66■■□□□ 1.06
Usp43Q8BUM9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.66■■□□□ 1.06
Usp43Q8BUM9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp43Q8BUM9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp43Q8BUM9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp43Q8BUM9 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Usp43Q8BUM9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Usp43Q8BUM9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp43Q8BUM9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Usp43Q8BUM9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Usp43Q8BUM9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Usp43Q8BUM9 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Usp43Q8BUM9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Usp43Q8BUM9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Usp43Q8BUM9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Usp43Q8BUM9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Usp43Q8BUM9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp43Q8BUM9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp43Q8BUM9 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp43Q8BUM9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp43Q8BUM9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Usp43Q8BUM9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp43Q8BUM9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Usp43Q8BUM9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Usp43Q8BUM9 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Usp43Q8BUM9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Usp43Q8BUM9 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp43Q8BUM9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Usp43Q8BUM9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp43Q8BUM9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp43Q8BUM9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp43Q8BUM9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Usp43Q8BUM9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.62■■□□□ 1.05
Usp43Q8BUM9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Usp43Q8BUM9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Usp43Q8BUM9 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp43Q8BUM9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp43Q8BUM9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Usp43Q8BUM9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.61■■□□□ 1.05
Usp43Q8BUM9 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.61■■□□□ 1.05
Usp43Q8BUM9 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Usp43Q8BUM9 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.61■■□□□ 1.05
Usp43Q8BUM9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp43Q8BUM9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp43Q8BUM9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp43Q8BUM9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Usp43Q8BUM9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Usp43Q8BUM9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Usp43Q8BUM9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Usp43Q8BUM9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
Usp43Q8BUM9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.6■■□□□ 1.05
Usp43Q8BUM9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.6■■□□□ 1.05
Usp43Q8BUM9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Usp43Q8BUM9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.59■■□□□ 1.05
Usp43Q8BUM9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Usp43Q8BUM9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.59■■□□□ 1.05
Usp43Q8BUM9 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Usp43Q8BUM9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Usp43Q8BUM9 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.59■■□□□ 1.05
Usp43Q8BUM9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Usp43Q8BUM9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Usp43Q8BUM9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
Usp43Q8BUM9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Usp43Q8BUM9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.58■■□□□ 1.04
Usp43Q8BUM9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
Usp43Q8BUM9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Usp43Q8BUM9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.58■■□□□ 1.04
Usp43Q8BUM9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Usp43Q8BUM9 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Usp43Q8BUM9 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Usp43Q8BUM9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Usp43Q8BUM9 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Usp43Q8BUM9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Usp43Q8BUM9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp43Q8BUM9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp43Q8BUM9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Usp43Q8BUM9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp43Q8BUM9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp43Q8BUM9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Usp43Q8BUM9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp43Q8BUM9 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp43Q8BUM9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.55■■□□□ 1.04
Usp43Q8BUM9 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Usp43Q8BUM9 Gm45444-201ENSMUST00000211394 898 ntBASIC21.55■■□□□ 1.04
Usp43Q8BUM9 Gm5921-201ENSMUST00000075898 882 ntBASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms