Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.74■■□□□ 1.07
Ubr7Q8BU04 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubr7Q8BU04 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubr7Q8BU04 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubr7Q8BU04 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ubr7Q8BU04 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Ubr7Q8BU04 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.73■■□□□ 1.07
Ubr7Q8BU04 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ubr7Q8BU04 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ubr7Q8BU04 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ubr7Q8BU04 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ubr7Q8BU04 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ubr7Q8BU04 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr7Q8BU04 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Ubr7Q8BU04 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Ubr7Q8BU04 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr7Q8BU04 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Ubr7Q8BU04 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr7Q8BU04 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ubr7Q8BU04 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.71■■□□□ 1.07
Ubr7Q8BU04 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr7Q8BU04 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr7Q8BU04 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Ubr7Q8BU04 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.69■■□□□ 1.06
Ubr7Q8BU04 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Ubr7Q8BU04 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ubr7Q8BU04 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ubr7Q8BU04 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ubr7Q8BU04 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Ubr7Q8BU04 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ubr7Q8BU04 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.68■■□□□ 1.06
Ubr7Q8BU04 Etf1-202ENSMUST00000180351 108 ntBASIC21.68■■□□□ 1.06
Ubr7Q8BU04 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.68■■□□□ 1.06
Ubr7Q8BU04 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Ubr7Q8BU04 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.68■■□□□ 1.06
Ubr7Q8BU04 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ubr7Q8BU04 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ubr7Q8BU04 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Ubr7Q8BU04 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.68■■□□□ 1.06
Ubr7Q8BU04 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ubr7Q8BU04 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.67■■□□□ 1.06
Ubr7Q8BU04 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.67■■□□□ 1.06
Ubr7Q8BU04 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.67■■□□□ 1.06
Ubr7Q8BU04 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ubr7Q8BU04 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ubr7Q8BU04 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Ubr7Q8BU04 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.66■■□□□ 1.06
Ubr7Q8BU04 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.66■■□□□ 1.06
Ubr7Q8BU04 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ubr7Q8BU04 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubr7Q8BU04 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubr7Q8BU04 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.65■■□□□ 1.06
Ubr7Q8BU04 Gm10399-202ENSMUST00000202768 748 ntBASIC21.65■■□□□ 1.06
Ubr7Q8BU04 Gm40881-201ENSMUST00000223397 166 ntBASIC21.65■■□□□ 1.06
Ubr7Q8BU04 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ubr7Q8BU04 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ubr7Q8BU04 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubr7Q8BU04 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ubr7Q8BU04 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ubr7Q8BU04 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ubr7Q8BU04 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.63■■□□□ 1.05
Ubr7Q8BU04 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.63■■□□□ 1.05
Ubr7Q8BU04 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ubr7Q8BU04 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ubr7Q8BU04 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.63■■□□□ 1.05
Ubr7Q8BU04 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ubr7Q8BU04 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ubr7Q8BU04 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Ubr7Q8BU04 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Ubr7Q8BU04 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ubr7Q8BU04 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.62■■□□□ 1.05
Ubr7Q8BU04 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ubr7Q8BU04 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ubr7Q8BU04 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Ubr7Q8BU04 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ubr7Q8BU04 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ubr7Q8BU04 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ubr7Q8BU04 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ubr7Q8BU04 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ubr7Q8BU04 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr7Q8BU04 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.6■■□□□ 1.05
Ubr7Q8BU04 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.6■■□□□ 1.05
Ubr7Q8BU04 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr7Q8BU04 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr7Q8BU04 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr7Q8BU04 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Ubr7Q8BU04 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.6■■□□□ 1.05
Ubr7Q8BU04 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr7Q8BU04 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr7Q8BU04 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr7Q8BU04 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr7Q8BU04 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr7Q8BU04 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr7Q8BU04 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr7Q8BU04 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ubr7Q8BU04 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Ubr7Q8BU04 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ubr7Q8BU04 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Ubr7Q8BU04 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ubr7Q8BU04 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms