Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sfr1Q8BP27 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sfr1Q8BP27 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sfr1Q8BP27 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Sfr1Q8BP27 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sfr1Q8BP27 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sfr1Q8BP27 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sfr1Q8BP27 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sfr1Q8BP27 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Sfr1Q8BP27 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.58■■□□□ 1.05
Sfr1Q8BP27 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.58■■□□□ 1.05
Sfr1Q8BP27 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Sfr1Q8BP27 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Sfr1Q8BP27 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sfr1Q8BP27 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.04
Sfr1Q8BP27 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Sfr1Q8BP27 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sfr1Q8BP27 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sfr1Q8BP27 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sfr1Q8BP27 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Sfr1Q8BP27 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sfr1Q8BP27 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.57■■□□□ 1.04
Sfr1Q8BP27 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.57■■□□□ 1.04
Sfr1Q8BP27 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sfr1Q8BP27 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sfr1Q8BP27 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sfr1Q8BP27 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sfr1Q8BP27 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Sfr1Q8BP27 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.56■■□□□ 1.04
Sfr1Q8BP27 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Sfr1Q8BP27 Gm5812-201ENSMUST00000061073 957 ntBASIC21.55■■□□□ 1.04
Sfr1Q8BP27 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sfr1Q8BP27 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sfr1Q8BP27 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
Sfr1Q8BP27 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sfr1Q8BP27 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sfr1Q8BP27 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sfr1Q8BP27 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sfr1Q8BP27 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sfr1Q8BP27 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sfr1Q8BP27 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.54■■□□□ 1.04
Sfr1Q8BP27 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sfr1Q8BP27 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sfr1Q8BP27 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sfr1Q8BP27 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.53■■□□□ 1.04
Sfr1Q8BP27 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Sfr1Q8BP27 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Sfr1Q8BP27 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.53■■□□□ 1.04
Sfr1Q8BP27 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.52■■□□□ 1.04
Sfr1Q8BP27 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sfr1Q8BP27 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sfr1Q8BP27 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sfr1Q8BP27 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sfr1Q8BP27 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Sfr1Q8BP27 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sfr1Q8BP27 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Sfr1Q8BP27 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sfr1Q8BP27 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sfr1Q8BP27 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.52■■□□□ 1.04
Sfr1Q8BP27 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sfr1Q8BP27 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.03
Sfr1Q8BP27 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Sfr1Q8BP27 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sfr1Q8BP27 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sfr1Q8BP27 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.51■■□□□ 1.03
Sfr1Q8BP27 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Sfr1Q8BP27 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sfr1Q8BP27 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sfr1Q8BP27 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sfr1Q8BP27 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sfr1Q8BP27 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Sfr1Q8BP27 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.5■■□□□ 1.03
Sfr1Q8BP27 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sfr1Q8BP27 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.5■■□□□ 1.03
Sfr1Q8BP27 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Sfr1Q8BP27 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sfr1Q8BP27 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sfr1Q8BP27 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sfr1Q8BP27 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sfr1Q8BP27 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sfr1Q8BP27 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sfr1Q8BP27 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sfr1Q8BP27 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sfr1Q8BP27 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Sfr1Q8BP27 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sfr1Q8BP27 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Sfr1Q8BP27 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sfr1Q8BP27 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Sfr1Q8BP27 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.49■■□□□ 1.03
Sfr1Q8BP27 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sfr1Q8BP27 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sfr1Q8BP27 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sfr1Q8BP27 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.48■■□□□ 1.03
Sfr1Q8BP27 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sfr1Q8BP27 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
Sfr1Q8BP27 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sfr1Q8BP27 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Sfr1Q8BP27 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
Sfr1Q8BP27 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sfr1Q8BP27 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms