Protein–RNA interactions for Protein: Q8BNE1

Tcaf1, TRPM8 channel-associated factor 1, mousemouse

Predictions only

Length 924 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcaf1Q8BNE1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC23.14■■□□□ 1.29
Tcaf1Q8BNE1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Tcaf1Q8BNE1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.14■■□□□ 1.29
Tcaf1Q8BNE1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
Tcaf1Q8BNE1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tcaf1Q8BNE1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Tcaf1Q8BNE1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Tcaf1Q8BNE1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tcaf1Q8BNE1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tcaf1Q8BNE1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tcaf1Q8BNE1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tcaf1Q8BNE1 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tcaf1Q8BNE1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tcaf1Q8BNE1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tcaf1Q8BNE1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tcaf1Q8BNE1 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Tcaf1Q8BNE1 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tcaf1Q8BNE1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tcaf1Q8BNE1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tcaf1Q8BNE1 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tcaf1Q8BNE1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tcaf1Q8BNE1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tcaf1Q8BNE1 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Tcaf1Q8BNE1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tcaf1Q8BNE1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Tcaf1Q8BNE1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tcaf1Q8BNE1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Tcaf1Q8BNE1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tcaf1Q8BNE1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Tcaf1Q8BNE1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Tcaf1Q8BNE1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Tcaf1Q8BNE1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tcaf1Q8BNE1 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tcaf1Q8BNE1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Tcaf1Q8BNE1 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tcaf1Q8BNE1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tcaf1Q8BNE1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
Tcaf1Q8BNE1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tcaf1Q8BNE1 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tcaf1Q8BNE1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tcaf1Q8BNE1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Tcaf1Q8BNE1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tcaf1Q8BNE1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Tcaf1Q8BNE1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.08■■□□□ 1.29
Tcaf1Q8BNE1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Tcaf1Q8BNE1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tcaf1Q8BNE1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tcaf1Q8BNE1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tcaf1Q8BNE1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC23.07■■□□□ 1.28
Tcaf1Q8BNE1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC23.07■■□□□ 1.28
Tcaf1Q8BNE1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tcaf1Q8BNE1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tcaf1Q8BNE1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tcaf1Q8BNE1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tcaf1Q8BNE1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Tcaf1Q8BNE1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.06■■□□□ 1.28
Tcaf1Q8BNE1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Tcaf1Q8BNE1 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Tcaf1Q8BNE1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Tcaf1Q8BNE1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Tcaf1Q8BNE1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC23.05■■□□□ 1.28
Tcaf1Q8BNE1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.05■■□□□ 1.28
Tcaf1Q8BNE1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC23.05■■□□□ 1.28
Tcaf1Q8BNE1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Tcaf1Q8BNE1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Tcaf1Q8BNE1 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Tcaf1Q8BNE1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC23.05■■□□□ 1.28
Tcaf1Q8BNE1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Tcaf1Q8BNE1 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.05■■□□□ 1.28
Tcaf1Q8BNE1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tcaf1Q8BNE1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC23.04■■□□□ 1.28
Tcaf1Q8BNE1 Gm9959-201ENSMUST00000068277 390 ntBASIC23.04■■□□□ 1.28
Tcaf1Q8BNE1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tcaf1Q8BNE1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.03■■□□□ 1.28
Tcaf1Q8BNE1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tcaf1Q8BNE1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23.03■■□□□ 1.28
Tcaf1Q8BNE1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.03■■□□□ 1.28
Tcaf1Q8BNE1 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC23.03■■□□□ 1.28
Tcaf1Q8BNE1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC23.03■■□□□ 1.28
Tcaf1Q8BNE1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tcaf1Q8BNE1 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tcaf1Q8BNE1 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Tcaf1Q8BNE1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.02■■□□□ 1.28
Tcaf1Q8BNE1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Tcaf1Q8BNE1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.02■■□□□ 1.28
Tcaf1Q8BNE1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC23.02■■□□□ 1.28
Tcaf1Q8BNE1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Tcaf1Q8BNE1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Tcaf1Q8BNE1 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Tcaf1Q8BNE1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Tcaf1Q8BNE1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Tcaf1Q8BNE1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Tcaf1Q8BNE1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.01■■□□□ 1.27
Tcaf1Q8BNE1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Tcaf1Q8BNE1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tcaf1Q8BNE1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tcaf1Q8BNE1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tcaf1Q8BNE1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tcaf1Q8BNE1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tcaf1Q8BNE1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms