Protein–RNA interactions for Protein: Q8BKN5

Tubgcp5, Gamma-tubulin complex component 5, mousemouse

Predictions only

Length 1,024 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp5Q8BKN5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Tubgcp5Q8BKN5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tubgcp5Q8BKN5 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tubgcp5Q8BKN5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tubgcp5Q8BKN5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tubgcp5Q8BKN5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Tubgcp5Q8BKN5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tubgcp5Q8BKN5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tubgcp5Q8BKN5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Tubgcp5Q8BKN5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Tubgcp5Q8BKN5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tubgcp5Q8BKN5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.1■□□□□ 0.97
Tubgcp5Q8BKN5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tubgcp5Q8BKN5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tubgcp5Q8BKN5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tubgcp5Q8BKN5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Tubgcp5Q8BKN5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Tubgcp5Q8BKN5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Tubgcp5Q8BKN5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tubgcp5Q8BKN5 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tubgcp5Q8BKN5 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.09■□□□□ 0.97
Tubgcp5Q8BKN5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tubgcp5Q8BKN5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.09■□□□□ 0.97
Tubgcp5Q8BKN5 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Tubgcp5Q8BKN5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Tubgcp5Q8BKN5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.08■□□□□ 0.97
Tubgcp5Q8BKN5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Tubgcp5Q8BKN5 Gm16437-201ENSMUST00000025669 507 ntBASIC21.08■□□□□ 0.97
Tubgcp5Q8BKN5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Tubgcp5Q8BKN5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Tubgcp5Q8BKN5 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Tubgcp5Q8BKN5 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Tubgcp5Q8BKN5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tubgcp5Q8BKN5 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tubgcp5Q8BKN5 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tubgcp5Q8BKN5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Tubgcp5Q8BKN5 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Tubgcp5Q8BKN5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tubgcp5Q8BKN5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Tubgcp5Q8BKN5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubgcp5Q8BKN5 Gm11687-201ENSMUST00000118911 886 ntBASIC21.06■□□□□ 0.96
Tubgcp5Q8BKN5 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubgcp5Q8BKN5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tubgcp5Q8BKN5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tubgcp5Q8BKN5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp5Q8BKN5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.05■□□□□ 0.96
Tubgcp5Q8BKN5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp5Q8BKN5 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tubgcp5Q8BKN5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.05■□□□□ 0.96
Tubgcp5Q8BKN5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp5Q8BKN5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.04■□□□□ 0.96
Tubgcp5Q8BKN5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp5Q8BKN5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp5Q8BKN5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tubgcp5Q8BKN5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tubgcp5Q8BKN5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tubgcp5Q8BKN5 Gm11175-201ENSMUST00000116172 543 ntBASIC21.03■□□□□ 0.96
Tubgcp5Q8BKN5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tubgcp5Q8BKN5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tubgcp5Q8BKN5 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tubgcp5Q8BKN5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp5Q8BKN5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp5Q8BKN5 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp5Q8BKN5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp5Q8BKN5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
Tubgcp5Q8BKN5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp5Q8BKN5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp5Q8BKN5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tubgcp5Q8BKN5 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tubgcp5Q8BKN5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tubgcp5Q8BKN5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tubgcp5Q8BKN5 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tubgcp5Q8BKN5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tubgcp5Q8BKN5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.01■□□□□ 0.95
Tubgcp5Q8BKN5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tubgcp5Q8BKN5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tubgcp5Q8BKN5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tubgcp5Q8BKN5 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tubgcp5Q8BKN5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tubgcp5Q8BKN5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Tubgcp5Q8BKN5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Tubgcp5Q8BKN5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Tubgcp5Q8BKN5 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tubgcp5Q8BKN5 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tubgcp5Q8BKN5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21■□□□□ 0.95
Tubgcp5Q8BKN5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
Tubgcp5Q8BKN5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tubgcp5Q8BKN5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tubgcp5Q8BKN5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Tubgcp5Q8BKN5 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tubgcp5Q8BKN5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tubgcp5Q8BKN5 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tubgcp5Q8BKN5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.99■□□□□ 0.95
Tubgcp5Q8BKN5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tubgcp5Q8BKN5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tubgcp5Q8BKN5 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Tubgcp5Q8BKN5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Tubgcp5Q8BKN5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tubgcp5Q8BKN5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tubgcp5Q8BKN5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms